Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0118 ATGAAGGAGTTTCCTTCTTGTTTTGGAGAAAATGGTGTTCAGGTTGTAGATTCCTCCTATTCAAGTACAACAAGGGGAGCTCAAAATGTTGTTACTTGTGTCTATCGGTGTAAGTTAGGAGGCCGTTCGTTCTTGATTACTGTCTCTTGGACCAAATATTTGATGGGACAAGGGTTGAGTGTGGGAATCGATGAGTTGGGTAATCATTGTCTCTGCAAGGTTGATATAAAGCCATGGTTGTTCTCAAAAAGAAAAGGGTCAAAGAATTTGGAGGTTGAGTCTAGCAAAATAGATATACTTTGGGACTTGAGCTGTGCTAAATTTGGTTCCGGGCCTGAACCATTGGAGGGATTTTATTTGGTTGTTGTGTTCAACCAAGAGATGGTCTTACTCCTTGGGGATCTGAAAAAGGAAGCATGCAAGAAGATTGACAGTGATTATGCTTGTGCTAACTCGGAAGCCGTTTTTATTGCAAAGAGAGAGCACATTTTTGGCAAGAAGTTTTATGGTGCAAAGGCTCAGTTTTGTGACAAGGGCCAAGTGCATGATGTGAGAATTGAGTGTGATACACTTGGGCTTAATGATCCATGCCTTGTGATCCGAATTGATAGCAAGACGGTGATGCAGGTGAAGCAACTCAAGTGGAAATTCCGGGGCAATCACACTATTTTGGTGGATGGCCTACCAGTGGAAGTGTTTTGGGATGTACATAATTGGCTCTTTGGAAATGCTCTGGGAAATGCAGTCTTTATGTTCCAAACTTGCATTTCAACCGAGAAGATGTTCTCAGGCCAATCTGTTTCTGATCCTTCTGTTCTCACATGGGCTTACTCTCAGCAGTTCAGGGATTCCCAGTTGCAAGGTCTTGGATTCTCTCTCATTTTGTATGCTTGGAGAAATGAGTAG 906 0.4249 MKEFPSCFGENGVQVVDSSYSSTTRGAQNVVTCVYRCKLGGRSFLITVSWTKYLMGQGLSVGIDELGNHCLCKVDIKPWLFSKRKGSKNLEVESSKIDILWDLSCAKFGSGPEPLEGFYLVVVFNQEMVLLLGDLKKEACKKIDSDYACANSEAVFIAKREHIFGKKFYGAKAQFCDKGQVHDVRIECDTLGLNDPCLVIRIDSKTVMQVKQLKWKFRGNHTILVDGLPVEVFWDVHNWLFGNALGNAVFMFQTCISTEKMFSGQSVSDPSVLTWAYSQQFRDSQLQGLGFSLILYAWRNE* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0118 301 Pfam Plant protein of unknown function (DUF868) 27 299 IPR008586 -
Vra3g0118 301 PANTHER PLANT/T24G3-80 PROTEIN 1 300 - -
Vra3g0118 301 PANTHER EXPRESSED PROTEIN 1 300 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0118 Vra-Chr3 1330389 1333047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0118 1 301 EF-hand Containing Proteins AT3G04860 57.895 8.28e-122 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0118 - - gmx:100786850 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0118 3 1330389 1333047 Vra3g0118 3 1330389 1333047 ECH
Vra3g0118 3 1330389 1333047 Vra8g1129 8 26117901 26119724 PCT