Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0116 ATGGATTCCGTTGTCCTTCACAGTGTGAGTGCGTCATCAGCGGCTTCGTCGTCGTCTACGTCGTCAATGGCGAAGCGTCCATGTCCGTCGCAAAACCCTAGAGTGGAGAACCTGAGCGACGTGGAACGTCTTCTGGACGCGTTTCTCTCCCTTTCCGACCTCCCTTCTCTCTCCCTCGATCTCTCCTTCGAGAGGCTTCTCCAATCTGTCTCCCCTGACTCCGATCTTATCGATCGCGCCCTCAAAATGGGTTCTCTCCTTCTTGACGCCGCCAAACACTCCTCTCGGAAACGCGCTTCCAACCACAATTCCCTCGCCTGGCCCCTCCCTCCCGACCTCACCATCAAGGTGTTCTCAATGCTTGATACCCAGAGTCTGTGCTATGCATCAGCTACTTGTTCAATGTTTAGCAAATGTGCTAAAGATCCTCTGTGCTATACAAATCTTGATTTGACAACACTTGTTCCGAAGGTTAACAATGCAGTAGTTGCCACGATGATTCAGCGAGCTGGAAAGGCACTAAGGTCTCTTAAGCTTGGCGTTGTCCCTGGTGCTACTACTTCACTTGGATCTTGTCCACCATTTGTTTGTACCATTAGAAATGCTATTGTGGAAGTATCAAACTTTTCATGGAATGATAAGAGGTCTCGACAAGGGAGGGAGTCATCCATTCTCACAAGATGCTGCTTAAGCCCTTTAAGTGGTGATGGTGGTACCCCAGGGGCTCTTTTAAGAAAGTTACACTTGTATAATATTGAGAGAATGGATAATGCATCCCTTGGTGCAGCATTGTCTGCATGCCCATCTCTCCTTGATTTGGAAATTGTTGGGCTCCATGTTGAGCTGAGGCAAACATTAATGTCAGTAAGTGCAAACTGCCATTTGATAGAACGCTTGTTTTTTGAGTCTTCTAAAACAGGTAGAGATGACAGCTTGAAAGCACAAACCTGTTTTGAGCTAGAAAATTGTCCTCATCTAACTTCTTTATCCCTTAGAGGGTTTAAGCTACATGATTGCAAAGTTCGTGTATTGGTTAAGGGATTTAGGAAATTGAAGTATGTTGACTTTTCAACGTCTTATTCAATCACTGGTAACTTCTTGAGAAACCTTGGAAGCTGCAATGGGGGAAATTTTCTTGAGGTCTTAATTTTAAGGGATTGCATGCATCTCAAAGAGATGGAAGTCGCGAGGCTGTTGACTGCAATCCTTGCTGGAGACTTCAAATTTCTTGTACATCTTGATATATCCAATAGGGAAGGTTTAGCATCTGAGGCTGATTGGTACCACAGGTGCTACAACTCTAGTATTATGCCTATAAAACAGGTTTTGGAAACGAGGCCTGATATGTGTCTGGTGGCTGAATATCCATCAGCAGAAGGAAGCTATATGGAGACATTTGATGCTGATATGAATAGTGAGATAAGTCTGCCCTCACAATTGAGTAGCCACACGTCAGATGGATCAATTTTTATGAGTACATCTGAAAGCAGCTACAATAGTGATCAGGGAAGTGGCAATGAGGATGGTCAAGATGCCAACTACGTGATATACGAGGAAAGCTCAGATGAGATTGACTTTTTGTCCCTCTAG 1590 0.4472 MDSVVLHSVSASSAASSSSTSSMAKRPCPSQNPRVENLSDVERLLDAFLSLSDLPSLSLDLSFERLLQSVSPDSDLIDRALKMGSLLLDAAKHSSRKRASNHNSLAWPLPPDLTIKVFSMLDTQSLCYASATCSMFSKCAKDPLCYTNLDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVPGATTSLGSCPPFVCTIRNAIVEVSNFSWNDKRSRQGRESSILTRCCLSPLSGDGGTPGALLRKLHLYNIERMDNASLGAALSACPSLLDLEIVGLHVELRQTLMSVSANCHLIERLFFESSKTGRDDSLKAQTCFELENCPHLTSLSLRGFKLHDCKVRVLVKGFRKLKYVDFSTSYSITGNFLRNLGSCNGGNFLEVLILRDCMHLKEMEVARLLTAILAGDFKFLVHLDISNREGLASEADWYHRCYNSSIMPIKQVLETRPDMCLVAEYPSAEGSYMETFDADMNSEISLPSQLSSHTSDGSIFMSTSESSYNSDQGSGNEDGQDANYVIYEESSDEIDFLSL* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0116 529 SUPERFAMILY RNI-like 242 423 - -
Vra3g0116 529 MobiDBLite consensus disorder prediction 491 510 - -
Vra3g0116 529 PANTHER F-BOX SKIP17-LIKE PROTEIN 40 472 - -
Vra3g0116 529 Gene3D Ribonuclease Inhibitor 102 432 IPR032675 -
Vra3g0116 529 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 40 472 - -
Vra3g0116 529 MobiDBLite consensus disorder prediction 15 34 - -
Vra3g0116 529 MobiDBLite consensus disorder prediction 491 509 - -
Vra3g0116 529 SUPERFAMILY F-box domain 109 155 IPR036047 GO:0005515
Vra3g0116 529 Pfam F-box-like 109 151 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0116 K10268 - gmx:100786317 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0116 3 1319833 1326898 Vra3g0116 3 1319833 1326898 ECH