Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0112 ATGGCGTCCATGCGCTTCCCTTTCTCTTTTCCTCAGCCCCAACCGCCTCAGTTCCCTCGCCCCTTCACCGCATTTGCTGTTGGTGTTGCCGTTGCCGGTGCCTCCGCCGCCGTCGTGGCTGTCTCCTCCTCCGACCGCCCCTTTCTCAGGAATGCCCTGAATTCCGTCTTCTCTTCTGGCCACTCGTTGCCTCTCTGGGGTTCACTCAGCTTGGCCGACAGTGGGGTTTCCGTGCTTGAATCAAAGACTGGAACTTCCTTCCCCTCGGTTCTAGCCTCTTCTCAAAAACTCTGCGGAATTGGGTTGCGAAAAAAAAGCGTCTTGGGATTGAAGAACATTGATGTATACGCATTTGGTGTTTACGCTGATGATGATGACATAAAGACTCATCTTTCTGATAAATATGGGAAGTTCTCTGCGTCTGAATTGCAGGGCAATAAGGAGTTTATTGACGATCTTATGGAAAATGATATACCCATGACAGTTAGGCTTCAAATTGTGTATGGGAGATTGAGCATTCGTTCTGTGCGTAGTGCATTTGAAGAGTCTGTAGGAAGTAGGCTGCAGAAATTTGGGGGATCAGACAATAAAGAATTGCTTCAAAGGTTCACTTCTCAGTTTAGAGATGAAATAAAATTACCTCGTGGATCTGTAATTCATCTTTCAAGAGAGAAGGGCCATGTTCTTAACACCTCAATTGATGGACAGGAAGTGGGAAGCATCAAGAGTAAACTCCTCTGTAAATCAATTTTAGATTTATATTGTGGTGAAGAAGCATTTGATAAACAGGCCAAAGAAGAAATTGAGCACAACGTGGCTTCTTATCTCTAG 831 0.4561 MASMRFPFSFPQPQPPQFPRPFTAFAVGVAVAGASAAVVAVSSSDRPFLRNALNSVFSSGHSLPLWGSLSLADSGVSVLESKTGTSFPSVLASSQKLCGIGLRKKSVLGLKNIDVYAFGVYADDDDIKTHLSDKYGKFSASELQGNKEFIDDLMENDIPMTVRLQIVYGRLSIRSVRSAFEESVGSRLQKFGGSDNKELLQRFTSQFRDEIKLPRGSVIHLSREKGHVLNTSIDGQEVGSIKSKLLCKSILDLYCGEEAFDKQAKEEIEHNVASYL* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0112 276 Pfam Chalcone isomerase like 96 268 IPR016087 GO:0016872
Vra3g0112 276 SUPERFAMILY Chalcone isomerase 82 275 IPR036298 GO:0016872
Vra3g0112 276 PANTHER FATTY-ACID-BINDING PROTEIN 1 1 276 - -
Vra3g0112 276 PANTHER FATTY-ACID-BINDING PROTEIN 1 1 276 IPR044228 -
Vra3g0112 276 Gene3D - 126 269 IPR016089 -
Vra3g0112 276 Gene3D - 80 254 IPR016088 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0112 Vra-Chr3 1250480 1253987 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0112 - - var:108347943 438.728