Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0107 ATGGGGAGTCTTGCGGTTGAAACTGAGGATGTAAGCTCAGATATGTACCTTTCATTGGGGCTTAAGGAAACAGATAAAGGAGTAGGAGTTCCTCGGGTTTTATCACTTCTCTCTTCTGTTCTTGAGAGATTAGTTCAGAGAAATGAAACGCTATTGGAGGCAAATCACATAAAAGATGTTGTCACAGTATTTCATGGTTTAAGAGCTCCTAGTCTGAGTGTTCGTAAGTACATTGATCGTATCTTCAAGTACTCAGGTTGCAGCCCATCTTGCTTTGTTGTGGCACAGATATATGTGGATAGATTTATTCAGCACACAGAAATCAAATTGACTTCACTTAATGTGCACCGGCTTTTGATAACAAGCATTATGCTAGCCGCAAAGTTTGTAGATGACGCATTCTACAATAATGCTTACTATGCAAAAGTTGGGGGAGTAAGCACATCTGAATTAAACAGGTTGGAGATGAGTTTTCTGTTTGGAGTAGATTTTAGACTTCAGGTTAGTGTAGACACGTTTGGAAGATATTGTAGGCAATTGGAGAAGGAAGCCGCAGAAACACTACAAATTGAAAGGCCAATGCAGGCTTGTCGAATTAAAGAAAGCTGGTCAAACAAAGATGACCCTACTTGTGCTTCCACAATTGCAAGATAA 654 0.3991 MGSLAVETEDVSSDMYLSLGLKETDKGVGVPRVLSLLSSVLERLVQRNETLLEANHIKDVVTVFHGLRAPSLSVRKYIDRIFKYSGCSPSCFVVAQIYVDRFIQHTEIKLTSLNVHRLLITSIMLAAKFVDDAFYNNAYYAKVGGVSTSELNRLEMSFLFGVDFRLQVSVDTFGRYCRQLEKEAAETLQIERPMQACRIKESWSNKDDPTCASTIAR* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0107 217 CDD CYCLIN 76 159 IPR013763 -
Vra3g0107 217 Gene3D - 23 214 - -
Vra3g0107 217 PANTHER CYCLIN 9 204 - -
Vra3g0107 217 Pfam Cyclin 59 166 IPR013922 GO:0000079|GO:0019901
Vra3g0107 217 PANTHER UNCHARACTERIZED 9 204 IPR013922 GO:0000079|GO:0019901
Vra3g0107 217 SUPERFAMILY Cyclin-like 77 166 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0107 Vra-Chr3 1166039 1168605 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0107 - - gmx:100805926 388.652