Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0101 ATGGCTTCTCTTCATGATGATGGGGAAGTTGGTTTCGAAGAAGGAAAGCTCTTGCTACCCTCTAATGTTCTGGACGAGGCATGTGACTCCAGCAACAAGATTCATAAGAGGAGTCACCAGAAACATCAGCAACCAGGTTATCACAGATATCAAAGGGAAACACAATCACAGCGCTCAAAATTTACTGGAAGATCATCGTATCAAAGGCCTAAACATGCCACAGGTGGACCTGGAATGCAAGCTGTTTTCTTAGTTTCGGGCCAAGGATCATGTGGTGGTACTGGGGTGTTCTTACCCCAAAAAGCAGGCACAAAATCAACAAGAAAACCAGCATGTGCTCCAGTCCTCCTTCCAGCTCGAGTAGTTGAAGCTCTAAATCTGAAAGTGCACGAACTAGGCATGCAGATTTCACCTTCTCAAGGTCCTAAATATGGCGAAAGAAAGGGAGAAGTGTACAGAAGTGAGTCGAAAAAAGAGGGTATGAAGCAATGCAGTGTTATTAGTCAGAGTCAAAGTTGTTCTCCTGATATATTTCTTCCAAAGGAATGGACATACTAA 558 0.4373 MASLHDDGEVGFEEGKLLLPSNVLDEACDSSNKIHKRSHQKHQQPGYHRYQRETQSQRSKFTGRSSYQRPKHATGGPGMQAVFLVSGQGSCGGTGVFLPQKAGTKSTRKPACAPVLLPARVVEALNLKVHELGMQISPSQGPKYGERKGEVYRSESKKEGMKQCSVISQSQSCSPDIFLPKEWTY* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0101 185 PANTHER OS01G0850000 PROTEIN 51 185 - -
Vra3g0101 185 MobiDBLite consensus disorder prediction 30 76 - -
Vra3g0101 185 PANTHER TIP41-LIKE PROTEIN 51 185 - -
Vra3g0101 185 MobiDBLite consensus disorder prediction 49 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0101 Vra-Chr3 1069044 1073065 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0101 - - gmx:100781513 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0101 3 1069044 1073065 Vra8g1142 8 26394202 26396698 PCT