Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0096 ATGGGTGTAGCAACAAAATGTGTAATAATTGGTATTGCTTTGTTGTGGTTGTTGAGTGTTGCTGAGAGTGTTCCCAACACGAGCATCATCAACGTTCTCTGCAACAGTGGTGTGTACACCTCAGGGGACCCTTTTGCAATCAGTTTAAATTATGTGTTGGAAGACTTAGAGAAGGAAACAGCAACGAAAAAGAATTACGAGTACCACAACATTTCACCATATCCTAATGCCTATGCCTATGGGCATGCTACTTGTAACATTAATCTCACATCCTCTGATTGTAAAACATGTCTTGGTGCTGCTAAAATGGCCTTGTTTACCACATGCCAGGCACCACGGATAGGAGCTCGTTCAGTGCTCCATGATTGTACAATCAGGTACGAGCAATACCCATTTGACGATTAG 405 0.4247 MGVATKCVIIGIALLWLLSVAESVPNTSIINVLCNSGVYTSGDPFAISLNYVLEDLEKETATKKNYEYHNISPYPNAYAYGHATCNINLTSSDCKTCLGAAKMALFTTCQAPRIGARSVLHDCTIRYEQYPFDD* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0096 134 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 8 133 - -
Vra3g0096 134 ProSiteProfiles Gnk2-homologous domain profile. 27 132 IPR002902 -
Vra3g0096 134 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 8 133 - -
Vra3g0096 134 Pfam Salt stress response/antifungal 34 130 IPR002902 -
Vra3g0096 134 Gene3D - 26 132 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0096 Vra-Chr3 1022369 1022773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0096 80 132 Receptor kinase-like Gene Family AT4G23140 45.455 5.95e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0096 - - gmx:102664018 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0096 3 1022369 1022773 Vra3g0096 3 1022369 1022773 ECH