Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0095 ATGAGCAAGAACGTTTCTACAAAGGATGCGGGCGACAACTCCGTGACCCACTTTGATTTTCTCAAGAAATTTAAACGCTTTTCCCCTCTTGACTCTTCTCTTGGAGTTCTCGCGTTCTTCTTCGTCGCTTCTCTCTTCATCGCTTGCTTCTTCTACGTGGATTACAAAGGGTTCCGCTCCCGAGCCACCACCGTCCTTGACTTCGATTTTTCATCATCTTCAACTTCTTCTGTTACTTCTCCTGTTACTTTTTCTTCTGCTTCGAGCCCGGTTCAGTTTCTGAGCCCTGAGGGTCATGCCTGTGATGTCTTTGATGGGAATTGGGTTTGGGATGAGACTTACCCCCTTTACAATTCCGCAAACTGTTCCTTCATGGATCAAGGTTTTCGCTGCTCCGAGAATGGCAGGCCTGACACCTTCTACACTAAATGGCGATGGCAACCCAAAGATTGCAACTTGCCCAGATTTGACGCAGGAAAGATGTTGGAAAAGCTACGGAACAAGCGACTGGTTTTTGTTGGTGATTCAATCGGAAGGAACCAATGGGAATCGCTTCTTTGTATGCTGTCTTCGGCAATTCCAAATAAGGCTAGGGTCTACGAGGTTAATGGGAGCCCAATTACAAAGCACACAGGCTTCTTGGCATTCAAGTTTGAAGATTTCAACTGCACCATTGAATACTATAGATCACCGTATCTTGTAGTGCAGGGACGACCTCCTTCTGGTGCACCTGATGGGGTAAGAATGACTTTGAGATTGGATCACATGGACTGGATTTCACATAAGTGGAGGGATGCAGATGTGCTGGTTCTCAATGCTGGACATTGGTGGAATTATGAGAAGACTGTCAAAATGGGCTGTTACTTCCAAATAGGGGAGAAAGTGAAGATGAATATGACTACAGAAGACGCATTCAGGAAATCAATAGAGACAGTAGTTCATTGGATAGCTAATGAAGTAAACATAAACAAAACTTACGTCCTTTTCCGAACTTACGCTCCCGTCCATTTCAGGGGTGGTGACTGGAATACTGGCGGTGGTTGTCACTTGGAAACATTACCTGATTTAGGTTCCTTGCCAGCAGCATCCGACATCCATTTCAGAACCGTCGTCGATGTCTTGTCAGAACTCAAAAATAAATCAAATTTCTTGAATACGGATTTGCTTAATGTGACACAAATGTCAATTCGCCGGAGAGACGGCCATGCATCCATTTACTATCTCGGACCAGATGGTACGGCCCCAATGCAGCGGCAAGATTGTAGCCATTGGTGCCTACCTGGTGTTCCCGATTCATGGAATGAGCTTCTTTATGCTCTTCTTCTCAAGAGGGAGGAATTTCGGGAACAGAAACAGAACACAACAAATGTTTCTCAAGTTCCAATATAA 1389 0.45 MSKNVSTKDAGDNSVTHFDFLKKFKRFSPLDSSLGVLAFFFVASLFIACFFYVDYKGFRSRATTVLDFDFSSSSTSSVTSPVTFSSASSPVQFLSPEGHACDVFDGNWVWDETYPLYNSANCSFMDQGFRCSENGRPDTFYTKWRWQPKDCNLPRFDAGKMLEKLRNKRLVFVGDSIGRNQWESLLCMLSSAIPNKARVYEVNGSPITKHTGFLAFKFEDFNCTIEYYRSPYLVVQGRPPSGAPDGVRMTLRLDHMDWISHKWRDADVLVLNAGHWWNYEKTVKMGCYFQIGEKVKMNMTTEDAFRKSIETVVHWIANEVNINKTYVLFRTYAPVHFRGGDWNTGGGCHLETLPDLGSLPAASDIHFRTVVDVLSELKNKSNFLNTDLLNVTQMSIRRRDGHASIYYLGPDGTAPMQRQDCSHWCLPGVPDSWNELLYALLLKREEFREQKQNTTNVSQVPI* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0095 462 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 22 449 - -
Vra3g0095 462 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 153 439 IPR026057 GO:0016740
Vra3g0095 462 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 22 449 IPR029962 GO:0016413
Vra3g0095 462 Pfam PMR5 N terminal Domain 100 152 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0095 Vra-Chr3 1017010 1021303 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0095 - - gmx:100779356 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0095 3 1017010 1021303 Vra3g0095 3 1017010 1021303 ECH