Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0086 ATGGGTGCTGCGGAATCAGTCTCGGAAAATTCCATCCATGAATTCTCGGTCAAGGATCCCAAGGGAAGAGACGTGAACCTCACCACCTACAAGGGGAAGGTTCTGCTTGTAGTTAACGTTGCTTCAAAATGTGGATTTACGAATTCCAATTACACCCAGTTAACTGAGCTTTACAGCAGATACAAAGACAAAGGTCTTGAGATACTGGCATTTCCATGCAACCAGTTTTTGAAGCAAGAGCCGGGGAATAGCCTGGAGGCAGAGCAATTTGCCTGTACAAGGTACAAGGCCGAGTATCCCATTTTTGGAAAGATACGTGTCAATGGACCTAATACAGCACCTGTCTACAAATTCCTTAAAGCAAATAAATCAGGATTTTTGGGTTCTAGGATAAAGTGGAATTTCACCAAGTTTCTGGTTGACAAGGAAGGGAAAGTCCTAAAGCGTTATGGTCCAACCACCTCACCGCTGTCCATTGAAAACGACATCAAGAGGGCATTGGGGGAGGCTTGA 513 0.4483 MGAAESVSENSIHEFSVKDPKGRDVNLTTYKGKVLLVVNVASKCGFTNSNYTQLTELYSRYKDKGLEILAFPCNQFLKQEPGNSLEAEQFACTRYKAEYPIFGKIRVNGPNTAPVYKFLKANKSGFLGSRIKWNFTKFLVDKEGKVLKRYGPTTSPLSIENDIKRALGEA* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0086 170 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Vra3g0086 170 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Vra3g0086 170 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Vra3g0086 170 PIRSF Glutathion_perox 1 170 IPR000889 GO:0004602|GO:0006979
Vra3g0086 170 PANTHER GLUTATHIONE PEROXIDASE 1 167 IPR000889 GO:0004602|GO:0006979
Vra3g0086 170 ProSiteProfiles Glutathione peroxidase profile. 2 170 IPR000889 GO:0004602|GO:0006979
Vra3g0086 170 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Vra3g0086 170 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Vra3g0086 170 Gene3D Glutaredoxin 3 169 - -
Vra3g0086 170 PANTHER GLUTATHIONE PEROXIDASE 1 167 - -
Vra3g0086 170 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Vra3g0086 170 ProSiteProfiles Thioredoxin domain profile. 1 168 IPR013766 -
Vra3g0086 170 SUPERFAMILY Thioredoxin-like 11 168 IPR036249 -
Vra3g0086 170 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0086 Vra-Chr3 929432 933138 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0086 - K00432 gmx:100306136 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0086 3 929432 933138 Vra3g0086 3 929432 933138 ECH
Vra3g0086 3 929432 933138 Vra8g1162 8 26622833 26625303 PCT