Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0084 ATGGCGAGTATTGCGGATATTAGTCTTTCGGCAGCCATCAATCTGTTGTCTGCATTGGCATTCCTGTTGGCCTTTGCAGTATTGCGACTTCAGCCCTTTAATGACCGGGTCTACTTCCCAAAATGGTATCTGAAGGGGATAAGAGGCAGCCCAACAGGTTCCACAGCGGTAAAGAAATTTGTTAACTTGGACTTTCGGACCTACATCAGGTTTCTGAACTGGATGCCTGCAGCGTTGCATATGCCAGAACCTGAACTCATTGATCATGCAGGCCTTGACTCAGCAGTGTTTATTCGGATATATCTTCTTGGGTTAAAAATATTTGCCCCAATTACCCTGCTTGCTTTTATCGTTTTGGTTCCTGTGAACTGGACAGGGAACACATTAGAAGAACAGGGAGCTAAGAATTTGACATATAGCGATATTGACAAGATTTCAATATCGAACATCCCATTTGGATCAGATAGGTTTTGGGCGCATATTGCAATATCATATGTCTTCTCATCTTGGACATGCTATAGTCTATACAAGGAGTACAAGAATGTCGCAGCAATGAGATTGCGATTTTTGGCAGCTGAAAGTCGTCGTCCGGACCAATTTACTGTCCTGGTGAGGAATGTTCCCCCCGATACCGATGAATCAGTCACTGAGCACATCGAACATTTTTTTTGCGTCAACCATCCTGATCACTATCTAATGCATCAGGTTGTTTATAATGCGAACAAGCTTGCAGCAATAGTTGCACAGAAGAAGGCATTACAGAACTGGTATATTTATTACCAAAACAAATACGAAAGAGATCCTTCCACGAGGCCAACTACTCGGACAGGTTTCATGGGTCTTGTGGGGACTAAAGTCGATGCTATTGATCATTATACTGAATCAATTGAAACACTGAGCAAAGAAGAAGCGGAAGAAAGAGAAATCGTTAAAAAAAATCCGGATGCTATTATGCCTGCAGCTTTTGTTTCATTCAAAACACGATGGGGAGCTGTTGTGTGCGCTCAAACTCAGCAAACCAGTGATCCAACTATTTGGCTCACAGATTGGGCTCCAGAGCCACGGGATGTCTTTTGGGAAAATCTAGCAATTCCATATTTTGAGCTGAACATGAGGAGATTGGTCATGAATGTCGCTTTATTTTTCCTCACATTTTGCTTTATGATTCCAATAGCATTTGTCCAATCCTTGGCCAACATTGAGTCGATTATGAAGGTCTTACCTTTCTTGAAGCCAATAATCCAAGAGCCATCTATCAAGTCTCTCATTCAAGGATTTCTTCCAGGGATAGCATTAAAGATATTTCTTGCAGTGCTTCCGAAAATTCTGATGACGATGTCGAAAGTGGAAGGTTATACTTCCCTTTCAAGTTTGGATCGGAGATCAGCTTCCAAATATTACTTGTTTATTCTCATCAACGTATTCCTTGGGAGTGTAATAACAGGAACAGCATTTCAGCAACTTCAGCAGTTTCTTAATCAGACCTCTACAGAGTTCACAAAAACAGTTGGCAGTACAATCCCCATGAAAGCCACATTTTTTATCACATACATAATGGTCGATGGTTGGGCTGGAATAGCTGCAGAGGTTCTCAGGTTAGTTCCGTTAATTACTTTCCACCTGAAAAACGCTTTCTTGGTGAAGACGGAGCAAGACAGAGAGAGTGCAATGGATCCTGGAAGCTTGGATTTTGCCACATCTGAACCTCGCATCCAGTTATATTTCATGCTGGGGCATGTGTACGCTCCAGTCACACCTTTTCTTCTCCCCTTCATTGTAATCTTCTTTGGTTTTGCCTACTTGATCTTTCGGCACCAGATTATCAATGTGTATAACCAGCAATACGAGAGTGGAGGAGCGTTTTGGCCAGATGTCCATGGCCGAGTAGTTATGGGCTTGATTATATCTCAAATTCTTCTGATGGGATTGTTAAGTACAAGAGGTACAGAGACGTCGACGCTAGTGCTTATTGCACAACCTATCTTGACATTCTGGTTTCACAGATATTGCAAAGGCCTCTTTGAATCTGCATTTGTAAAATTTCCACTACAGGAAGCAATGGTGAAGGATACACTTGAACGGGCAGTTGAGCCAAACTTAAACCTTAGAGTTTACCTTCAGAATGCTTACGTACACCCAGTTTTTAAGGACAATGATTTTGAAAAACCAGCAGCCGTTGATGATGAAGAGGAGAATCCACTAATCAAGACAACGAGACATACTCGTAGGGGTAGCAAATCTGAAAGTGAAAACGGCGGTTGCTAA 2265 0.4212 MASIADISLSAAINLLSALAFLLAFAVLRLQPFNDRVYFPKWYLKGIRGSPTGSTAVKKFVNLDFRTYIRFLNWMPAALHMPEPELIDHAGLDSAVFIRIYLLGLKIFAPITLLAFIVLVPVNWTGNTLEEQGAKNLTYSDIDKISISNIPFGSDRFWAHIAISYVFSSWTCYSLYKEYKNVAAMRLRFLAAESRRPDQFTVLVRNVPPDTDESVTEHIEHFFCVNHPDHYLMHQVVYNANKLAAIVAQKKALQNWYIYYQNKYERDPSTRPTTRTGFMGLVGTKVDAIDHYTESIETLSKEEAEEREIVKKNPDAIMPAAFVSFKTRWGAVVCAQTQQTSDPTIWLTDWAPEPRDVFWENLAIPYFELNMRRLVMNVALFFLTFCFMIPIAFVQSLANIESIMKVLPFLKPIIQEPSIKSLIQGFLPGIALKIFLAVLPKILMTMSKVEGYTSLSSLDRRSASKYYLFILINVFLGSVITGTAFQQLQQFLNQTSTEFTKTVGSTIPMKATFFITYIMVDGWAGIAAEVLRLVPLITFHLKNAFLVKTEQDRESAMDPGSLDFATSEPRIQLYFMLGHVYAPVTPFLLPFIVIFFGFAYLIFRHQIINVYNQQYESGGAFWPDVHGRVVMGLIISQILLMGLLSTRGTETSTLVLIAQPILTFWFHRYCKGLFESAFVKFPLQEAMVKDTLERAVEPNLNLRVYLQNAYVHPVFKDNDFEKPAAVDDEEENPLIKTTRHTRRGSKSESENGGC* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0084 754 Pfam Calcium-dependent channel, 7TM region, putative phosphate 372 644 IPR003864 GO:0016020
Vra3g0084 754 MobiDBLite consensus disorder prediction 722 747 - -
Vra3g0084 754 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 3 743 IPR045122 GO:0005227
Vra3g0084 754 Pfam Late exocytosis, associated with Golgi transport 9 178 IPR032880 -
Vra3g0084 754 Pfam Cytosolic domain of 10TM putative phosphate transporter 199 361 IPR027815 -
Vra3g0084 754 MobiDBLite consensus disorder prediction 722 754 - -
Vra3g0084 754 PANTHER OS05G0393800 PROTEIN 3 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0084 Vra-Chr3 891703 901950 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0084 K21989 - gmx:100776693 1282.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0084 3 891703 901950 Vra3g0084 3 891703 901950 ECH