Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0081 ATGTTGTTCTTCTCGTACTTCAAGGATTTGGTGGGAAGAGAAGTAACTGTAGAGCTGAAGAACGATTTGGCCATCAGAGGGACATTGCATTCCGTTGATCAGTACCTCAACATCAAGCTCGAAAACACTCGCGTCGTTGATCAAGACAAGTACCCCCACATGCTTTCAGTAAGAAACTGCTTCATCAGAGGTTCGGTAGTGAGATACGTGCAATTACCTCCAGAAGGGGTGGACATTGAATTGTTGCACGATGCCACTAGGAGAGAGGCTAGGAGCGGTTAG 282 0.4681 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARSG* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0081 93 CDD LSm2 2 90 IPR016654 GO:0006397
Vra3g0081 93 Gene3D - 1 92 - -
Vra3g0081 93 PANTHER SNRNP CORE PROTEIN FAMILY MEMBER 1 90 IPR016654 GO:0006397
Vra3g0081 93 Pfam LSM domain 7 71 IPR001163 -
Vra3g0081 93 SUPERFAMILY Sm-like ribonucleoproteins 3 91 IPR010920 -
Vra3g0081 93 SMART Sm3 5 72 IPR001163 -
Vra3g0081 93 PIRSF Lsm2 1 93 IPR016654 GO:0006397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0081 K12621 - qsu:112008381 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0081 3 867651 869823 Vra3g0081 3 867651 869823 ECH