Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0079 ATGGTGCAGAGTCTTTGTTTGATGGCATCTCATGGTTACCCAACTGGCCTTGTCTTACACTCACAACTGGGTTTGGCGGGTACCAACATGAAGGGCTACCAAATGTCCTTTCCTTCTCCAGTAGCGAAAGTCGACCTGATTAGATATGAGTCTCCTTATCTCAAGCAAAGCTCAGGTGGGGAGTCAAGGAAATTCCAAAATGAATGGGTTGATTACAATGAGGTTATTAATGTTGACTTCTCAGTTCAACGTCCCGTGCTTACTGATGAAAAAGCAAACTGCTCAAGTGCAGTCCTTTTTGGCTTTGGAATTGTTGAACAATGCACTAAGCGTGATAACATTACAAATTTGCTAATGTCTGAGACTGCTGAAGCAGGGAAAGATGGAGCAAATTTATCTTTGTTATCGAAGTTGAAGAAATTGCAGTTGTCAGGCAATGGTGAATCTCAGCAACCATTGTCATCCCTTATCTATCCAAGTAATCAATTCATTATTCGGAAGCCTTTACTGCGTTTAGTTCAAGCTTCAGCCCTTTCTTCAAAGATCACGGTTCATCCAGATGGTCAAATCACATTTATGGGTACTGCAATTGAGTTGAAAGATCTTGTCTCTGTAATTGCTGAGTCATACTTATCAAAAAGCTCACGAAAGGGTGAAAAGCAATCTATGGTTGTTCCACACTTCAATTGGGTGAATATCAATGAATTAGAGAGAAGTCATCCCTCTACATTGAAGAATCAATCCACCTTGACTGCTCCTTTAAAGAGCCCTGAGAAAGTGAAACTCAAGCCATCTCCAAGAAAGAGCAAGAAAGTAGGCATGGACAGGGATCGCTACAAAAACTATTCGTATGCATGTGAGACCCTTCTGACCCTGATGGTGGACAAGAAGCAGCGTGGCAGGAAAGCAATTCTCTCCCTGAAGAAATTTAGCTCTGAGCTTTTTGATCTCCTGACACAGTTTACTGCCAGTATTGGTGGAACCGGCCTTGCTTTTCTGCTATTTGTTGTGTGTAACCTAGCTGATGGAAAGGCTACCTTCTGTGCTTCTAACTTTTTCAACACTGGGTTTGGATTGGGGTTGGTTTGTCTTGCTGGGGCAGTAAATAAGCTCAGGATCACAATTTTGAACATCAGCAAGAGCGCAGGAAAGTTTGGTTTGAAAGAAGAGAAAATGATGCAGAAGCTGGATGAGAGCACAAGAGATATTTACTATACTGCTGCAGCATTGCTAGCAGTGGTGATGCTTAGATTTGCTTCTTGA 1263 0.4212 MVQSLCLMASHGYPTGLVLHSQLGLAGTNMKGYQMSFPSPVAKVDLIRYESPYLKQSSGGESRKFQNEWVDYNEVINVDFSVQRPVLTDEKANCSSAVLFGFGIVEQCTKRDNITNLLMSETAEAGKDGANLSLLSKLKKLQLSGNGESQQPLSSLIYPSNQFIIRKPLLRLVQASALSSKITVHPDGQITFMGTAIELKDLVSVIAESYLSKSSRKGEKQSMVVPHFNWVNINELERSHPSTLKNQSTLTAPLKSPEKVKLKPSPRKSKKVGMDRDRYKNYSYACETLLTLMVDKKQRGRKAILSLKKFSSELFDLLTQFTASIGGTGLAFLLFVVCNLADGKATFCASNFFNTGFGLGLVCLAGAVNKLRITILNISKSAGKFGLKEEKMMQKLDESTRDIYYTAAALLAVVMLRFAS* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0079 420 PANTHER OS05G0143300 PROTEIN 2 419 - -
Vra3g0079 420 PANTHER PROTEIN, PUTATIVE-RELATED 2 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0079 Vra-Chr3 850792 856664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0079 - - gmx:100777424 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0079 3 850792 856664 Vra3g0079 3 850792 856664 ECH
Vra3g0079 3 850792 856664 Vra8g1165 8 26697737 26701886 PCT