Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0065 ATGAAGAAAGGGAAGGGTAAGAATAGCGGCTTGTTGCCAAATTCACTGAGGATAATTTCTCTGTGCCTAAAGACTGTGTCAACGAATGCCACCACAGTTGCTTCTACTGTGCGCTCCGCCGGCGCCTCGGTCGCCGCTTCAATTTCCTCTTCCGAGGATCACAAGGATGAGGTAACCTGGGCTGGTTTTGATACACTGGAACTTGATCCATCAAACTTCAAACGCGTTCTTTTACTTGGTTATCTGAATGGATTTCAAGTTCTTGATGTGGAAGATGCCTCTGGCTTCAGTGAACTGGTCTCAAAGCGTGATGGTCCAGTTTCCTTTCTACAGATGCAGCCCTTCCCTATCGGTGGTGATGACCGGGAGGGACTCAGAAAGTCGCACCCTTTACTGTTGGTAGTTTCTGGGGATGGTAATAGCAATGTTAACCGGAACAGTACTTGTTCGAGTGGTTTAGAAAGGGACGACAACGTTGAGATGCATTCTGGAAACAATGTCAACTTTTCAACAACTGTTCGGTTTTACTCCATGAAGTCTCACTGTTATGTTCGTGTTCTGAAGTTTCGTTCCACCGTGTGTATGATCAGATGCAGTTCACGGATAGTAGCAGTTGGTCTTGCCACACAAATCCACTGCTTTGATGCCGTAACTCTTCAGAATAAGTTCAGTGTTCTCACTTATCCTGTTCCTCAGTTAGCTGGAAAAGGAACAACTGGTGTTAATGTTGGTTATGGTCCCTTGGCTGTGGGTCCGAGGTGGTTGGCATATGCTTCTAACAGCCCCCTTCCCTCTAATTTAGGTTGCTTAAGCCCTCAAAACATCAGTGCTTCAGCAGGAATTAGTCCATCAATTACTCCAAGCAATGGTAGTTTTGTGGCTCGTTATGCAGTGGAGTCCAGTAGACATTTAGCTGCTGGAATAATCAAATACTGTCACGAGCTTCTTCCTGATGGCTCCTCTTCACCTATGCCATCAAATTTAGGTGTGAAAGTCAATAGGGTTACAGGAACTGACGCAGATAATGTGGGCATGGTAGCCGTTAGGGATTTTGTTTCCGAAATTATCATATCACAATTCAAAGCTCACAGTAGTCCTATTTCTGCACTATGTTTTGATCCTAGTGGGACCCTTCTAGTTACTGCATCGGTCTATGGGAATAACATTAATATATTTCGTATAATGCCATCATTCACAGGCAAGAGTTCAGGAATTCCAAGCTCAAATTGGAACTCTTCTCATGTGCATCTTTATAAACTTCATCGTGGAATAACACCAGCTATGATTCAGGATATCTGTTTCAGTAACTTTAGTCAGTGGATTGCAATTGTCTCCTCCAAGGGTACATGTCATCTGTTCATTTTATCACCCTTTGGAGGTGATACTGGTTTTCGAATTATAAGTTCTCAAGGTGAAGAACCGTCCCTACTTCCAGTTTTTCCTCTACCTTGGTGGTATTCGCCGGGTTCCATTTCTTATCAGCAATCTCTGCCTCCCCCAGCACCCGTTGTCCTTTCTGTGGCTAGCCGGATAAAATATAGTAGTTTTGGATGGCTTAATACTGTTCACAATTCTGCTGCAAATTATACAGGAAAAGTTTTTGTTCCATCTGGTGCTATCGCTGCTATCTTTCATAATTCCTTATCTCACTCGCAGCTTAACTTGAAGGCAAACCCCTTAGAGCATATATTGGTATATACGCCTTCAGGTCATGTTGTTCAACATGAACTTCTGCCATCAGTTGATTCAGAAACAGGTGATAGTAGTTTGACAAACCAGTCGACTTCAGTCCTGCATGTGCAGGAAGATGAATTCAGAGTCAAAGTTGAACCTATTCAATGGTGGGATGTCTGTAGAAGGTCAGAATGGCCAGAAAGAGGGGATACTTGCATCAATACCCTTGATGGACAAGGAAGTACTGAGAGAGTTCAAGAGAAAACAGGTTATAGTGACATCCCTGGATCGGATTTTTTGGGTATAACTGATGGGGCAGAGGAAAAGATGATAAAATCTTCTAGTGAAAATATGCAAGAGAGGTTTCATAGGTATCTGTCAAATGCAGAGGTGCAAGGCAATTTTGGAAGGTTACCCATATGGCAAAAGTCTAAGATTTGTTTCTATTCAATGAGTTCTGTGGGAGCTAGTTTCAGTGCTACAGGGGAGTTTGAGATTGACAGGGTCCCTGCTAATGAAATTGAAATAAGGCAGAAGGAGCTGTTGCCTGTTTTTGACCATTTTCATAGTATCAGATCAAGCTGGAATGAGAGAGGCCTAGCTGGGGAAAGACATTTTAGCCCTTCGTCTCCCGTTCCGAATCAAGGTGATTATAAGGAGACTGCGGATGTGACGGTTATTTGTCATTCAAAGCCAGCATCGCTGAGTTCCACTGAAAGCTCTGATGGAGGTTCATCAAGAAGAATTGAAAATCTGCTTGACTTGGATCAAGTTGCTTCCAGTTATCAAATACACAATGAGATGTGCCTGGAAAGAATGGGCACAATCAATGTTGAGCCTTCTCTGAAACATGTCGATTTTAATGCTGACCTTACTGGCAGTCCTATACTCCAGATGAAAAATATAACTTCTGATGGAAGAGATTCTATAGGTTTTGGGATCGAAGAGAACTCGGCATTGGTCTTAGAAGATTCTTCACCCGAGAGTGAATTTGTGGAATCAAAGCAAGATGAAGGTGTTGGGATATCTTTAATAGATGAGCACTGCAAAACACAGAAACATGATGGAAGTGACCTGTTAACTGAAGTTGTAACTGATGATGTTGACAGCAGCAGTAGCCACCACGGAAAAGAACAACTGGAGGAGGATGAAGAGAATGATGAAATGTTTGGTGGTATGTTTGCCTTTTCCGAAGAAGGTTGA 2877 0.4289 MKKGKGKNSGLLPNSLRIISLCLKTVSTNATTVASTVRSAGASVAASISSSEDHKDEVTWAGFDTLELDPSNFKRVLLLGYLNGFQVLDVEDASGFSELVSKRDGPVSFLQMQPFPIGGDDREGLRKSHPLLLVVSGDGNSNVNRNSTCSSGLERDDNVEMHSGNNVNFSTTVRFYSMKSHCYVRVLKFRSTVCMIRCSSRIVAVGLATQIHCFDAVTLQNKFSVLTYPVPQLAGKGTTGVNVGYGPLAVGPRWLAYASNSPLPSNLGCLSPQNISASAGISPSITPSNGSFVARYAVESSRHLAAGIIKYCHELLPDGSSSPMPSNLGVKVNRVTGTDADNVGMVAVRDFVSEIIISQFKAHSSPISALCFDPSGTLLVTASVYGNNINIFRIMPSFTGKSSGIPSSNWNSSHVHLYKLHRGITPAMIQDICFSNFSQWIAIVSSKGTCHLFILSPFGGDTGFRIISSQGEEPSLLPVFPLPWWYSPGSISYQQSLPPPAPVVLSVASRIKYSSFGWLNTVHNSAANYTGKVFVPSGAIAAIFHNSLSHSQLNLKANPLEHILVYTPSGHVVQHELLPSVDSETGDSSLTNQSTSVLHVQEDEFRVKVEPIQWWDVCRRSEWPERGDTCINTLDGQGSTERVQEKTGYSDIPGSDFLGITDGAEEKMIKSSSENMQERFHRYLSNAEVQGNFGRLPIWQKSKICFYSMSSVGASFSATGEFEIDRVPANEIEIRQKELLPVFDHFHSIRSSWNERGLAGERHFSPSSPVPNQGDYKETADVTVICHSKPASLSSTESSDGGSSRRIENLLDLDQVASSYQIHNEMCLERMGTINVEPSLKHVDFNADLTGSPILQMKNITSDGRDSIGFGIEENSALVLEDSSPESEFVESKQDEGVGISLIDEHCKTQKHDGSDLLTEVVTDDVDSSSSHHGKEQLEEDEENDEMFGGMFAFSEEG* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0065 958 Pfam WD domain, G-beta repeat 358 385 IPR001680 GO:0005515
Vra3g0065 958 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 7 957 IPR045142 GO:0006914
Vra3g0065 958 SUPERFAMILY WD40 repeat-like 170 453 IPR036322 GO:0005515
Vra3g0065 958 SMART WD40_4 353 393 IPR001680 GO:0005515
Vra3g0065 958 SMART WD40_4 411 454 IPR001680 GO:0005515
Vra3g0065 958 Pfam Breast carcinoma amplified sequence 3 500 741 IPR022175 -
Vra3g0065 958 MobiDBLite consensus disorder prediction 923 958 - -
Vra3g0065 958 Gene3D - 21 468 IPR015943 GO:0005515
Vra3g0065 958 PANTHER AUTOPHAGY-RELATED PROTEIN 18H 7 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0065 Vra-Chr3 733993 740265 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0065 - - gmx:100785780 1509.2