Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0056 ATGGCCAACTCTACCATTTTCCTTTGCCTTAACCTCTCTTTACTAATATCTCTCGTCACCGCCACTTACTATCAAAGCTTAGCCCCAACGCTAATGGGTTTCCGTGAAGACAAGTTCACTCATCTTCACTTCTTCTTCCACGACGTAGTCACCGGGCCCAACCCCAGCATGGTCATTGTCGCCGAGCCCAACGGAAAAGCCAAGGACGCCCTTCCCTTCGGCACCGTCGTCGCCATGGACGACCCCTTGACTGCCGGACCCGAACCCGACTCCAAACTCGTGGGGAAGGCCCAGGGGATTTACACTTCCATTTCTCAGGCTGAGATGGGGCTTATGATGGTTATGACCATGGCCTTCACCGACGGAGACTTCAACGGCAGCAGCATAAGCGTGTTGGCCAGAAACATGATCATGAGCGAACCTGTTAGGGAAATGGCCATCGTTGGCGGCACTGGCGCTTTTCGCTTCGCTCGTGGCTATGCTCAGGCCAGGTTCCACTCCGTCGATTTCTCCAAAGGCGATGCCATCGTCGAATACGACGTCTTCGTCAACCACTATTGA 561 0.5401 MANSTIFLCLNLSLLISLVTATYYQSLAPTLMGFREDKFTHLHFFFHDVVTGPNPSMVIVAEPNGKAKDALPFGTVVAMDDPLTAGPEPDSKLVGKAQGIYTSISQAEMGLMMVMTMAFTDGDFNGSSISVLARNMIMSEPVREMAIVGGTGAFRFARGYAQARFHSVDFSKGDAIVEYDVFVNHY* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0056 186 PANTHER NUCLEOPORIN-RELATED 6 185 IPR004265 -
Vra3g0056 186 PANTHER DIRIGENT PROTEIN 6 185 - -
Vra3g0056 186 Gene3D - 32 173 IPR044859 -
Vra3g0056 186 Pfam Dirigent-like protein 40 183 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0056 Vra-Chr3 622012 623287 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0056 - K25075 gmx:100500621 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0056 3 622012 623287 Vra3g0056 3 622012 623287 ECH