Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0054 ATGGCTAACTCAAAAAACCTTACATGCATTTTCACCATCATTCTCAGCCTTCTCTTTTCGTTCACAGCCGCAAAATCTTCTACTTTCTACCGAAACCTATCTCCCATGTCTTTGGGATTCAAGAAGGAGAAGCTCAGCCACCTTCACTTCTTCTTCCACGACATTGTCAGCGGTCCAAACCCCACCGCCGTCGGAGTGGCGGAGGCCGCCTCCACCAACTCTTCTTCCACACTTTTCGGATTTATAGCTATGATCGACGACCCATTGACTGTGGGCCCCGAACCTGGATCCAAACTCGTGGGAAAGGCCCAAGGTGTTTACGGATCTGCGGCCCAACAGGAAACGGGCCTGTTGATGGTAATGAACTTCGTGTTCACTGAAGGGAAATACAATGGCAGCACGCTGAGCTTGTTGGGGCGGAATGCGGTGTTCTCCAGCGTGAGGGAAATGCCAATCGTTGGAGGAAGCGGGGCTTTTCGGTTCGCACGTGGGTATGCTCAGGCAAAGACTCACACGTTTGATCTGAAGACCGGAGATGCTGTTGTGGAGTACAATGTCTACGTGTTCCATTATTAA 576 0.5069 MANSKNLTCIFTIILSLLFSFTAAKSSTFYRNLSPMSLGFKKEKLSHLHFFFHDIVSGPNPTAVGVAEAASTNSSSTLFGFIAMIDDPLTVGPEPGSKLVGKAQGVYGSAAQQETGLLMVMNFVFTEGKYNGSTLSLLGRNAVFSSVREMPIVGGSGAFRFARGYAQAKTHTFDLKTGDAVVEYNVYVFHY* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0054 191 PANTHER NUCLEOPORIN-RELATED 8 190 IPR004265 -
Vra3g0054 191 Gene3D - 36 187 IPR044859 -
Vra3g0054 191 PANTHER DIRIGENT PROTEIN 8 190 - -
Vra3g0054 191 Pfam Dirigent-like protein 46 189 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0054 Vra-Chr3 606630 607465 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0054 - - gmx:100816095 313.538