Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0053 ATGGCCAATTCCACAAGTCTCACATCCATTTTCACCATCATCGTTCTCAACCTAATCTTATCATTTGCTAGCGCAAAATCTTCTACCTTCTATCAAAACCTATCCCCGAAGTCTTTGGGGCTGAAGAAGGAGAAGCTCAGCCACCTTCACTTCTTCTTCCATGACATTGTCAGCGGCCCAAACCCCACCGCCGTCAGAGTGGCGGAGTCCCCTTCCACAAACTCTTCCTCCACGCTTTTCGGATTCATAGCAATGATCGACGACCCATTGACTGTGGGCCCCGAACCGGAATCCAAAATGGTGGGAAAGGCTCAAGGAGTATACGGATCTGCATCCCAAAACGAACTGGGTCTATTGATGGTAATGAACTTGATGTTCACGGAAGGGAAATATAATGGCAGCACACTGAGCTTGTTGGGGCGGAATGCGGTGTTCTCTAGCATAAGGGAAATGCCAATAATCGGAGGAAGTAGGGCTTTTCGGTTTGCACGTGGTTATGCTCAGGCAAAGACTTACACGTTTGATTTAAAGACCGGAAATGCTGTTGTGGAGTACAACGTTTACGTTTTGCATTATTAA 579 0.4698 MANSTSLTSIFTIIVLNLILSFASAKSSTFYQNLSPKSLGLKKEKLSHLHFFFHDIVSGPNPTAVRVAESPSTNSSSTLFGFIAMIDDPLTVGPEPESKMVGKAQGVYGSASQNELGLLMVMNLMFTEGKYNGSTLSLLGRNAVFSSIREMPIIGGSRAFRFARGYAQAKTYTFDLKTGNAVVEYNVYVLHY* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0053 192 PANTHER DIRIGENT PROTEIN 5 191 - -
Vra3g0053 192 Gene3D - 35 186 IPR044859 -
Vra3g0053 192 PANTHER NUCLEOPORIN-RELATED 5 191 IPR004265 -
Vra3g0053 192 Pfam Dirigent-like protein 47 189 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0053 Vra-Chr3 605006 605809 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0053 - - gmx:100816095 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0053 3 605006 605809 Vra3g0053 3 605006 605809 ECH