Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0051 ATGGCTAATTCAAGAAGCTTCACAGCCTTTTTCACCGTCATCGTTCTCAGCCTACTGTTCTCATTGGCCACCGCAAAATCTTCTACTTTCTACCGAAGCCTATCTCGGAAGTCTTTGGGGCTCAATAAGGAGAAGCTCGACCACCTTCACTTCTTCTTCCACGACATTGTCAGCGGTCCAAACCCCACCGCCGTCAGAGTGGCGGAGGCCGCCTCCACCAACTCTTCTTCCACACTTTTCGGATTTATAGCTATGATGGACGACCCATTGACTGTGGGCCCCGAACCTGGATCAAAACTCGTGGGAAAGGCCCAAGGTGTTTACGGATCTGCGGCCCAAAACGAACTGGGTCTATTGATGGTAATGAACTTCGTGTTCACTGAAGGGAAATACAATGGCAGCACGCTGAGCTTGTTGGGGCGGAATGCGGTGTTCTCCAGCGTGAGGGAAATGCCAATCGTTGGAGGAAGCGGGGCTTTTCGGTTCGCACGTGGGTATGCTCAGGCAAAGACTCACACGTTTGATCTGAAGACCGGAGATGCGGTTGTGGAGTACAACGTTTACGTGTTCCATTATTAA 579 0.5112 MANSRSFTAFFTVIVLSLLFSLATAKSSTFYRSLSRKSLGLNKEKLDHLHFFFHDIVSGPNPTAVRVAEAASTNSSSTLFGFIAMMDDPLTVGPEPGSKLVGKAQGVYGSAAQNELGLLMVMNFVFTEGKYNGSTLSLLGRNAVFSSVREMPIVGGSGAFRFARGYAQAKTHTFDLKTGDAVVEYNVYVFHY* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0051 192 Gene3D - 34 188 IPR044859 -
Vra3g0051 192 PANTHER NUCLEOPORIN-RELATED 9 191 IPR004265 -
Vra3g0051 192 Pfam Dirigent-like protein 47 190 IPR004265 -
Vra3g0051 192 PANTHER DIRIGENT PROTEIN 9 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0051 Vra-Chr3 587967 588794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0051 - - gmx:100816095 303.908