Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0049 ATGTCTGGAAAAGCATCAACTTCAAAGCCTAATATAGGTCTGAGTGGATCTGATGGTCTTTCACACGCTTACATTCATTATCCACCACTTCGGTGCAATGTTCCTGGATCTAGTGGATTATTTTATGATGATGGAAATAAGTTGGTACTCTCTCCAACAGTTGACCAGGTCTTTTCATGGAAAGTTAGTCTNTTTGATCCTCTAATTGATCCAACCGCTGACTCAATAAGTGAAGNCCCTATTATAGCTATTCGATATTCTTTAGACACAAAGGTAATAGCAATCCAGCGATCAAACCATGAGATACAGTTTTGGGATAGAGAGACTGGGGGTACTTTTAGCCATANGTGCAGGCCAGAATCAGAAAGTATACTTGGGTTCTTTTGGACAGATAGTCAACAGTGTGATATTGTTCTTGTTAAGACAAGCGGTCTAGACTTGTATGCTTATAATTCAGAGTCAAAATCACTGCAACTGGTGCAAACAAAGAAACTGAATGTGAGTTGGTATGTTTACACCCATGAAAGTCGATTGGTTCTTCTTGCTTCTGGCATGCAGTGCAAGACATTCCATGGCTTTCAGATTTCATCTGCAGATATTGTTCGTTTGCCAAGATTTGAGATGGTTATGGCCAAATCTGAGGCAAATAATAAGCCTGTTTTAGCAGCTGAAGATGTCTTTATTGTCANTGTTTATGGTAGGATATACTGCTTACAAGTTGATAGAGTTGCTATGCTGCTCCATTCCTATCGGCTATATCGTGATGCAGTAATACAGCAGGGCTCTTTTCCAATTTATTCCAACAGGATTGCCGTGAGTGTGGTCGACAATGTCCTTCTTATTCATCAAGTTGATGCAAAGGTTGTTATACTTTATGATCTCTTTGCAGATTCTAGAGCACCAATATCTGCACCACTTCCTCTATTATTAAGGGGATTCCCCAGATCCAGCACTTCATCTCAATCTAGTGGCAGAGAAAGTGAGAGTTCTGACAGTAATATTTTGAGTAATCAGGCAGCAGTTACATACTCCAATGCATGGACTTTCCTAGTGCCTGACCTTGTGTGTGATGTGGCCAATAAGTTATTGTGGAAGTTCAATTTAGACATAGAGGCAATTTCTGCCAGTAGCTCAGAGGTCCCATCTGTATTAGAGTTCCTGCAGAGGCGGAGGTTGGAAGCTAACAAGGCTAAGCAATTGTGCTTGGGTATAACACGTACACTCATTCTAGAGCACAGGCCTGTGCCTGTGGTTGCCAAGGCTGTAAATGTACTAGTCAGCTCATACTCCCATTCAATTAAAACTGGTAGCTATCTTAAGAGACTGAAACCAGAAAAGACATCAACTTCTGCTGATCAAAATACTGGTGCTGAGGTATCTGCTATCGAAAGAGATTTAATTGGAAAATCAATCATTCATGAGTCTATGGAAAGAGTCGACAGTGGATCTCTTAATAAAGCTTCAACTGTTTCAAGTTTGGATTCTGATGATGAGTCTCAGTCTGCAAATCCAAAACACAATTCAAAGGATGCCCACAGTGCTTATGTTATGCAACCATCTCTTCAATCTGGGCAAGAGGAATCCCAACTTACTACCGCAGCAATTTCACCAGATGAGATGTACAGCTTTGTCTTTTCTCCTGTTGATGAAGAGATGGTTGGAGATCCTTCTTACTTGGTTGCTATCATTATTGAGTTCCTTCACAGTGCAAATTCAGAAAAGATACGTGTACTCCCAAATGTGTATGTATTAATTATTCAGCTTCTGGCTCGCAATGAACGTTATGCAGAGCTCGGGTTGTTTGTCTTAAACAAGATTCTGGAGCCATCTAAGGAAGTCGCACTTCAACTCCTAGAATCTGGTCGCCAGAGTGCTCAAACTAGGAAGCTTGGTCTAGATATGCTGAGACAATTAGGTTTACATCATGATTATGTTTTGCTGCTTGTGCAGGATGGATACTACCTTGAAGCCTTAAGATATGCACGGAAAAACAGGGTGGATACCATCCGGCCCTCATTGTTCTTAGAGGCAGCATTTGTTTCCAACGACTCTCAACATCTTGCTGCGGTTCTAAGGTTCTTTACAGATTTCCTTCCTGGCTTCAAAAACACCTCAGACCATAATAGATACTGCCGTATACTGAATGAAATGAACTCATCCTTAACTGTTTGA 2172 0.4088 MSGKASTSKPNIGLSGSDGLSHAYIHYPPLRCNVPGSSGLFYDDGNKLVLSPTVDQVFSWKVSLFDPLIDPTADSISEXPIIAIRYSLDTKVIAIQRSNHEIQFWDRETGGTFSHXCRPESESILGFFWTDSQQCDIVLVKTSGLDLYAYNSESKSLQLVQTKKLNVSWYVYTHESRLVLLASGMQCKTFHGFQISSADIVRLPRFEMVMAKSEANNKPVLAAEDVFIVXVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSFPIYSNRIAVSVVDNVLLIHQVDAKVVILYDLFADSRAPISAPLPLLLRGFPRSSTSSQSSGRESESSDSNILSNQAAVTYSNAWTFLVPDLVCDVANKLLWKFNLDIEAISASSSEVPSVLEFLQRRRLEANKAKQLCLGITRTLILEHRPVPVVAKAVNVLVSSYSHSIKTGSYLKRLKPEKTSTSADQNTGAEVSAIERDLIGKSIIHESMERVDSGSLNKASTVSSLDSDDESQSANPKHNSKDAHSAYVMQPSLQSGQEESQLTTAAISPDEMYSFVFSPVDEEMVGDPSYLVAIIIEFLHSANSEKIRVLPNVYVLIIQLLARNERYAELGLFVLNKILEPSKEVALQLLESGRQSAQTRKLGLDMLRQLGLHHDYVLLLVQDGYYLEALRYARKNRVDTIRPSLFLEAAFVSNDSQHLAAVLRFFTDFLPGFKNTSDHNRYCRILNEMNSSLTV* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0049 723 MobiDBLite consensus disorder prediction 513 532 - -
Vra3g0049 723 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 15 720 IPR040371 GO:0010506|GO:0035658
Vra3g0049 723 MobiDBLite consensus disorder prediction 483 532 - -
Vra3g0049 723 MobiDBLite consensus disorder prediction 483 498 - -
Vra3g0049 723 Pfam Colon cancer-associated protein Mic1-like 556 696 IPR009755 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0049 K24763 - gmx:100500389 1280.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0049 3 518107 533557 Vra3g0049 3 518107 533557 ECH