Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0046 ATGCCGGGATTAGCACAAAGGAATGAACAACTCACTAATGACTCGTCGAGGTCGCAGTGTACAGTTTCTTCAAATGGATTCTGGTCGAAGAATTCCAACGACGTTTGCTACAATCAACTCCAGAAGTTCTGGAGTGAGCTGTCACTGCAAGCTCGCCAAAAGTTGTTGAGGATAGACAAACAATCCCTTTTTGAGCAAGCTCGTAAAAATATGTACTGCTCCAGGTGCAATGGGTTACTTCTTGAAGGTTTTCTGCAGATTGCTACGCATGGGAAATCTTTGCAACAAGAAGGGATGGATGGCCAATTTCCTTGCAACAGATCCGGAGGTTTGCGAAAGCTAAACAGTGAAGGATTAAGCATTATCAATGGATGTCAAGATGAAATCCAAGATCCATCAATCCATCCTTGGGGAGGTTTGACTACAGCACGAGATGGCTCATTAACACTAATGAGCTGCTACTTGTATTCAAAGTCTTTGAAAGGACTGCAAATTGTATTCGATGGGGCACGTTCCAGGGAGCGGGAAAGAGAACTGCTTTATCCTGATGCCTGTGGTGGGGGAGGTCGTGGTTGGATAAGCCAAGGAATAGCTAGTTACGGTAGAGGACATGGTACAAGAGAAACATGTGCCTTGCATACTGCCAGACTTTCATGTGATACACTACTAGATTTTTGGTCAGCACTGGGAGAGGAAACACGACTTTCCCTTCTAAAAATGAAAGAAGAAGATTTTATTGAGAGACTTATGTACAGGTTTGATAGCAAGAGATTCTGCAGAGACTGTAGAAGAAATGTTATTCGAGAGTTCAAGGAACTAAAAGAATTGAAGCGCATGCGTAGAGAACCTCGCTGCACGAGCTGGTTTTGTGTTGCTGACTCAGCTTTTCAATATGAGGTATCTGATGACTCAGTTCAAGCTGATTGGCGTCAGACATTTGCTGATGCATCTGGAACATATCATCACTTTGAGTGGGCTGTGGGGACAACCGAAGGAAAATCTGACATTTTGGAATTTGAGAATGTGGGGTTAAATGGATGTGTTCGAGCCAGTGGCCTGGATCTTGGTGGTTTGAGTGCATGTTTTGTCACTCTCAGAGCTTGGAGATTAGATGGACGATGTACTGAATTTTCTGTTAAAGCCCATTCGTTGAAGGGTCAACAGTGTGTACATTGCAGGTTAACGGTAGGAGATGGTTTTGTTACAATCACAAAAGGGGAAAGTATCAGAAGATTCTTTGAGCATGCTGAAGAGGCTGAGGAAGAAGAGGATGATGATTCAATTGACAAGGATGGGAATGAGCTTGATGGAGAATGCTCCCGTCCCCAAAAGCATGCAAAAAGCCCTGAACTTGCTCGAGAATTTCTGCTAGATGCTGCCACTGTTATTTTCAAAGAGCAGGTTGAAAAGGCTTTCAGAGAAGGAACAGCACGCCAAAATGCACACAGCATATTCGTCTGTCTTGCACTAAAACTGCTGGAGGATCGAGTGCATGTAGCTTGCAGAGAAATCATTACTTTGGAAAAACAGATGAAGCTTCTTGAAGAAGAAGAAAAGGAAAAACGAGAAGAAGAAGAACGCAAGGAGAGGAGAAGGACAAAGGAAAGGGAGAAAAAGCTTAGGAGGAAGGAAAGACTAAAAGGAAAAGAAAAAGATAAAAGGTGTTCTGAATCAAATGATGCTCTTGGTTCTCCTGAAATCTCAAAGGAAGAATTGTCTGCAGTTGCTGATGTGGAGCAAAATTGTCCTAATAACTGCAGGAATTTAGTTATTGAAACAGAAGAGACTAATCTATCGAGGGATGATTCTTCTAAAATCCAAGGTGAAGAATTGTGTAGTGAGGATAAAACTTTGAAACCACAAGATCTCTCTCTTGATGATTGTGAGGGAGAAATTTCAAATGCAAAAGACGAGATGGATCAGTCTACAATTGAACAATCAATGCTTTCTCATCAAAGATTAAGATGCAGGAAAGAATTTCAACAGGATATGCCTATGAAGTGGTCTGACAGACGGCGATATGCAGTTGTTTCAGAAAATAGTGTGATGGTTGGCAAATCTGAACCAAGACATTGTGTAGAGAGTTTTATGACATCATCGAGGACAATGAATGGGTTGAATAGGCTATCAAGGATTAATGTCCCAACAAAATCAAATTGTCGAAATGGTGGTCCTCCCAAGTTTAATGAGAAGTTTTATAGTTCCAAGAATCGGGCAAATGAGAGATGTGATATTCATTCTTGCAGCTGTAGCTTGAGTGATGAATACAAGACAAGGGTTGAGCAACATTCTCCTATGACTAGAGTTAGTCCGGAGACAAAGCCTACATGTCAGTCTGAATCTGCAGGGGATACATCCAAGCAATTTTATCGTGGTACCAAGAATAATCAAGTAGACTATATGCACGAGAGTAATGGAAGATCCAAAAACAAAATCATTTTGGGGAACTATTCTGGCCGGGATTTGTTTCAATCGAAGAGAGTTTGGGAGCCTACTGAATCTCAGAAGAAATATCACAGCAGTAATTTTGAGTCTGATGTTATTTTGAGGTCCGCTAAAGTTCAAGGAACTCAGTCTGATCTGATCAAGTCATCTATTGGAGAAGCTGCTGAGTCAGGTGAAAATGATGTTGAGGAATGTAGTTCAAAGAGATTTGGTGGAGTGGATGAAAGGTGTCAAAATAGTTTTCACGTAGAAGCTGAAGGTTCTTGTAGCTCTATGGAAATTGCTTCAGAGGAACCTGGAATATGTTCAACTGTAGGCTTTGCCTTGAACAGTTCTGCTGATCCCACTCAAAGTAGCACTTTTAGCTCCGATAACTGCTCATTATGTTTAAGTGAGGGTGATAACAATACCACCTCGTCAAACCATGAAAATACAGAATCCTCAATCACATCAGATTCAGAAGATGTTGGCGGGCAATCTGAAGTAAGAAATAATTTGGATTACATGGAAAATATATTGTCTGATTGTCATGAAGTTGCCACAGAGAATAACGACAATGCAAACGGGGAGGAGGGTTTGGTAAGAAGTTCAAGTTCACTGATTGGTCCGTCCTTTGATGGTACAACAAATTATGCATTTGGGAATCATGTGGAAACTGCCCAAAATTTTGATGCTTGTTTTCCCACCACTAATGTGTGTTCTCAACCTCAAAGTATGTTTCCACCGTTGTCAAACCAAAATATTCATTTTCCAGTGTTTCAAGCTCCTTCAACAATGGGTTATTTCCATCAAAATCCGATTTCATGGCCAGGAGCTCCTACAAATGGGTTGATACCCTTCCCACACACAAATCCCTATTTATATGCCAGCCCTCTTGGATATGGCTTGAATGAGGACCCACGCTTCTGCTTGCAGTATGGGGCCTTGCAGCAACCAACTCCCATTTTCAACCCTGCCGTTCCTGTTCATCAGCCAATTGCCAGAGCTAATGTCTTGAATGCAGAGGTACGGACTCGGGTTTCCAAGCCAGCTTCTTTGGTACAGCATCTTAATGGATCTTTTGCAGAAAGGGCCGTTCCAGCTGGAACTATTTCCAAGAAACCAACATTATATGGAGAAGTTATACATGATAATTCTGCGAAGTCACTTGACAATAACAATGATTTTTCCTTGTTTCATTTTGGTGGACCCGTAGCCCTTTCAAAAGGATGTAAATCGGCGCACACATCTTTGAATGGAGATACTGTAGGCGATTTTGGGTCAAAAGGTTCAGCAGATCATGTTGAAAATGTCCATAATTGCAATAAAAAAGAGACTCCTGCTATGGAGGAATACAATCTGTTCGCAACAAGTAATAAAGGTTTCCAATTTTCTAAAATGATAAAGTGA 3834 0.4139 MPGLAQRNEQLTNDSSRSQCTVSSNGFWSKNSNDVCYNQLQKFWSELSLQARQKLLRIDKQSLFEQARKNMYCSRCNGLLLEGFLQIATHGKSLQQEGMDGQFPCNRSGGLRKLNSEGLSIINGCQDEIQDPSIHPWGGLTTARDGSLTLMSCYLYSKSLKGLQIVFDGARSRERERELLYPDACGGGGRGWISQGIASYGRGHGTRETCALHTARLSCDTLLDFWSALGEETRLSLLKMKEEDFIERLMYRFDSKRFCRDCRRNVIREFKELKELKRMRREPRCTSWFCVADSAFQYEVSDDSVQADWRQTFADASGTYHHFEWAVGTTEGKSDILEFENVGLNGCVRASGLDLGGLSACFVTLRAWRLDGRCTEFSVKAHSLKGQQCVHCRLTVGDGFVTITKGESIRRFFEHAEEAEEEEDDDSIDKDGNELDGECSRPQKHAKSPELAREFLLDAATVIFKEQVEKAFREGTARQNAHSIFVCLALKLLEDRVHVACREIITLEKQMKLLEEEEKEKREEEERKERRRTKEREKKLRRKERLKGKEKDKRCSESNDALGSPEISKEELSAVADVEQNCPNNCRNLVIETEETNLSRDDSSKIQGEELCSEDKTLKPQDLSLDDCEGEISNAKDEMDQSTIEQSMLSHQRLRCRKEFQQDMPMKWSDRRRYAVVSENSVMVGKSEPRHCVESFMTSSRTMNGLNRLSRINVPTKSNCRNGGPPKFNEKFYSSKNRANERCDIHSCSCSLSDEYKTRVEQHSPMTRVSPETKPTCQSESAGDTSKQFYRGTKNNQVDYMHESNGRSKNKIILGNYSGRDLFQSKRVWEPTESQKKYHSSNFESDVILRSAKVQGTQSDLIKSSIGEAAESGENDVEECSSKRFGGVDERCQNSFHVEAEGSCSSMEIASEEPGICSTVGFALNSSADPTQSSTFSSDNCSLCLSEGDNNTTSSNHENTESSITSDSEDVGGQSEVRNNLDYMENILSDCHEVATENNDNANGEEGLVRSSSSLIGPSFDGTTNYAFGNHVETAQNFDACFPTTNVCSQPQSMFPPLSNQNIHFPVFQAPSTMGYFHQNPISWPGAPTNGLIPFPHTNPYLYASPLGYGLNEDPRFCLQYGALQQPTPIFNPAVPVHQPIARANVLNAEVRTRVSKPASLVQHLNGSFAERAVPAGTISKKPTLYGEVIHDNSAKSLDNNNDFSLFHFGGPVALSKGCKSAHTSLNGDTVGDFGSKGSADHVENVHNCNKKETPAMEEYNLFATSNKGFQFSKMIK* 1278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0046 1277 MobiDBLite consensus disorder prediction 516 533 - -
Vra3g0046 1277 PANTHER OS10G0105400 PROTEIN 1 1268 - -
Vra3g0046 1277 MobiDBLite consensus disorder prediction 762 789 - -
Vra3g0046 1277 MobiDBLite consensus disorder prediction 417 447 - -
Vra3g0046 1277 Coils Coil 490 543 - -
Vra3g0046 1277 MobiDBLite consensus disorder prediction 763 789 - -
Vra3g0046 1277 Coils Coil 625 645 - -
Vra3g0046 1277 MobiDBLite consensus disorder prediction 516 568 - -
Vra3g0046 1277 MobiDBLite consensus disorder prediction 534 548 - -
Vra3g0046 1277 MobiDBLite consensus disorder prediction 949 974 - -
Vra3g0046 1277 MobiDBLite consensus disorder prediction 418 432 - -
Vra3g0046 1277 PANTHER - 1 1268 - -
Vra3g0046 1277 MobiDBLite consensus disorder prediction 433 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0046 Vra-Chr3 466312 474054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0046 - - vra:106757724 2497.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0046 3 466312 474054 Vra3g0046 3 466312 474054 ECH
Vra3g0046 3 466312 474054 Vra8g0219 8 2623439 2630983 PCT