Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0042 ATGTCGTCGGCACTCTCCATCCCCACCAAAACGCCGTTGGAGCGCAACTCAGCTTCTCCGTCTTCTGACTCTGACGTATTTGCCTCCTTCCGTTTCCGTGGCACCGTAATGAAGCGCAACCAGCGTTTCAAACGGGTTGCCAAATCCAGGTTACCGGTTCAACAAACCGAACCGGTTCGGCGTTCGCTCCGAGTCAAACCCAACCCATTACCGGAACCAGACACTTCTCCCGTTGAAATGAAAATCTTGCCACGCGATTTCTTCCAAATCGATGCCCTGGACCTTGCCCCACGTTTACTGGGAAAGTTTCTTCGCCGAGACGACGTCGTTCTTCGGATCACCGAGGTTGAAGCGTATAGACCAAACGACACGGCTTGTCACGGTCGTTTTGGTGTCACTTCAAGAACTGCCCCTGTTTTTGGAGCTGGTGGGCATGCCTATGTTTATCTTTGCTATGGTCTTCACATGATGCTGAATGTGGTGGCGGATAAGGAAGGAGCTGGCGCTGCTGTTTTGATACGCTCTTGTGCTCCAGTTAGTGGATTCGATGTCATTCAACAGCGCCGAGGTCTGAAAACTGAGAAACCTATACTTCTTACTGGTCCTGGGAAGGTTGGTCAGGCATTGGGTCTATCGACAGAATGGTCTAACCATCCTCTCTATACAGCTGGTGGTTTAGAACTCTTAGATGGTCCAGAGCCGGAAAACATATTGGTCGGTCCACGTGTTGGTATCCAATATGCTTCACCAGAGCATGTCAATGCATTGTGGAGATTTGCCATTGCAGGTACCCCATGGATTAGTGCTCCCAAAAACACTCTCAGGCCGGCCTTGTAG 837 0.5078 MSSALSIPTKTPLERNSASPSSDSDVFASFRFRGTVMKRNQRFKRVAKSRLPVQQTEPVRRSLRVKPNPLPEPDTSPVEMKILPRDFFQIDALDLAPRLLGKFLRRDDVVLRITEVEAYRPNDTACHGRFGVTSRTAPVFGAGGHAYVYLCYGLHMMLNVVADKEGAGAAVLIRSCAPVSGFDVIQQRRGLKTEKPILLTGPGKVGQALGLSTEWSNHPLYTAGGLELLDGPEPENILVGPRVGIQYASPEHVNALWRFAIAGTPWISAPKNTLRPAL* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0042 278 Hamap Putative 3-methyladenine DNA glycosylase. 85 268 IPR003180 GO:0003677|GO:0003905|GO:0006284
Vra3g0042 278 MobiDBLite consensus disorder prediction 1 25 - -
Vra3g0042 278 Pfam Methylpurine-DNA glycosylase (MPG) 87 264 IPR003180 GO:0003677|GO:0003905|GO:0006284
Vra3g0042 278 TIGRFAM 3mg: DNA-3-methyladenine glycosylase 83 268 IPR003180 GO:0003677|GO:0003905|GO:0006284
Vra3g0042 278 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 38 275 IPR003180 GO:0003677|GO:0003905|GO:0006284
Vra3g0042 278 SUPERFAMILY FMT C-terminal domain-like 80 272 IPR011034 GO:0003824
Vra3g0042 278 CDD AAG 87 268 IPR003180 GO:0003677|GO:0003905|GO:0006284
Vra3g0042 278 Gene3D - 78 275 IPR036995 GO:0003677|GO:0003905|GO:0006284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0042 K03652 - gmx:100813424 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0042 3 420614 423273 Vra3g0042 3 420614 423273 ECH