Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0040 ATGTCTGTAATAGGGGCGTGTTCACAGTTTGTTTACGGAGAGGTTTATCAGAGAGATGAACAGTGGGCACAGTGCTTGGTGAGTGGGAGAGGGTATCTGTTTTGTCACAGGAGTGGTGGGTGTGAGAACATATGGGTTGGAAGCAGAAAGAGAGAAAGGAAGATGAAAGGGAGAAATTTTCGCGTGGAAGCGATGTGGCCAGATTTGTCAAGACCAAGTCAAGTTGAGATGGAAGAAATCACTGATTCCGACCACCTCGATCAAATTCTTCTTCTTGCCCACGACAACTCACAACCTATCCTCATTGATTGGATGGCTACTTGGTGTCGGAAATGCATCTATTTGAAGCCCAAGTTGGAAAAATTAGCAGCTGAATATCTCAACAAAGTCAAATTTTATTACGTGGATGTGAATAAAGTACCCCAGACTCTAGTCAAGAGAGGCAACATATCTAAAATGCCAACAATTCAGCTGTGGAAAGATGGAGAGATGAAGGCAGAAGTGATTGGAGGCCATAAGGCCTGGCTAGTTACTGAAGAAGTCAGAGAAATGATCCAAAAGTTCTTATGA 570 0.4333 MSVIGACSQFVYGEVYQRDEQWAQCLVSGRGYLFCHRSGGCENIWVGSRKRERKMKGRNFRVEAMWPDLSRPSQVEMEEITDSDHLDQILLLAHDNSQPILIDWMATWCRKCIYLKPKLEKLAAEYLNKVKFYYVDVNKVPQTLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVTEEVREMIQKFL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0040 189 CDD TRX_family 84 186 - -
Vra3g0040 189 PANTHER THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC 1 188 - -
Vra3g0040 189 ProSiteProfiles Thioredoxin domain profile. 60 189 IPR013766 -
Vra3g0040 189 Pfam Thioredoxin 95 173 IPR013766 -
Vra3g0040 189 SUPERFAMILY Thioredoxin-like 76 185 IPR036249 -
Vra3g0040 189 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 1 188 IPR044253 GO:0009570
Vra3g0040 189 Gene3D Glutaredoxin 69 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0040 Vra-Chr3 415335 417027 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0040 - - gmx:100811965 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0040 3 415335 417027 Vra3g0040 3 415335 417027 ECH