Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0035 ATGAGGATCCGGAAAAGGCCGGTGCTTTTCCCGTCGTCGGTATCGCCGTTGCCTCTGTCAGATCCACACCTGATCAGCCGGTCGCCGGTGGTGGTGCAACTAAGCGAGGCTGCTTCCACGGCAGCGAAACGTTCTTCTTCTCCTTCTTCTGCAGTGCTCCATCGCCATGCTGCTTCGTGGAGCTTGGATCGTTGCCAGCCATCTGATCAGTCTCTACCTTCGATCGGGAAGCATAGCAACGGCTGGGATGATCCCTCCGGCATCGGTGAAAGTGGGGCACACAGACAGCACAACAAGCAAGACCCTTTGGATGAGGTTGTTGTTGGAAGGGAAGAAAGTGGAGAAGACTCCGGAGAGAAGGGTAATCATACCAGGAAAGGACGCAACTTGGGTTTGGAAACTCTAGCAGGGGTGTTGTCACCGTTAAGCCCTTCTTCTACTCAAGACAGATGGTACGAGGAAGAGAAAGCTATTCCGCTGAAGAAAAGGAGAGGGGCATTCGAGGAGAATAATACTGCTGCCACCCATAGCAAGAAGACGAAGGCGAAGATGAAGACGAAGATGAACAAGAAGTGTTCCTCCCGGAACGAGGATAGCACGGAAGAGGAAGATGAAGAAGAAAAGGGAGAAGAAACGAAAGTGGATGATGTAAACATGAATGTGAGTAAGAAGAGGGTAAGGGGTAGTGCACTCATGGAAGGTTCTAGGTGCAGTCGTGTGAATGGGAGGGGATGGAGGTGCTGTCAGCAAACTCTGGTTGGTTACTCGCTGTGTGAGCATCACTTGGGGAAGGGAAGACTCAGAAGCATGACAAGTGTTAGAAGCCGTTCCATTGCATCAACTGCACCAAAGAAGGTGCACATACACCACCACCACCATTCTTCTTCTTCTTCTTCTTCTTCTTCTCTAGAGAAACAAAATGCGAGTGTTGCTGAGCCCTTTGGGGAGGAGGAGGAGGAGAAGAAGCCGGAGATAATCACGAAGAAGAGGATGAAGCTGGGCGTTGTAAAAGCGCGTTCCATAAGCAGCTTGCTAGGACAAACGAACACCCAGATTGCTGGTGTAGCTCATGAGAATAGCAAGTAA 1086 0.5064 MRIRKRPVLFPSSVSPLPLSDPHLISRSPVVVQLSEAASTAAKRSSSPSSAVLHRHAASWSLDRCQPSDQSLPSIGKHSNGWDDPSGIGESGAHRQHNKQDPLDEVVVGREESGEDSGEKGNHTRKGRNLGLETLAGVLSPLSPSSTQDRWYEEEKAIPLKKRRGAFEENNTAATHSKKTKAKMKTKMNKKCSSRNEDSTEEEDEEEKGEETKVDDVNMNVSKKRVRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIASTAPKKVHIHHHHHSSSSSSSSSLEKQNASVAEPFGEEEEEKKPEIITKKRMKLGVVKARSISSLLGQTNTQIAGVAHENSK* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0035 361 MobiDBLite consensus disorder prediction 1 24 - -
Vra3g0035 361 MobiDBLite consensus disorder prediction 94 127 - -
Vra3g0035 361 Pfam WRC 233 273 IPR014977 -
Vra3g0035 361 MobiDBLite consensus disorder prediction 36 128 - -
Vra3g0035 361 MobiDBLite consensus disorder prediction 63 77 - -
Vra3g0035 361 MobiDBLite consensus disorder prediction 164 216 - -
Vra3g0035 361 MobiDBLite consensus disorder prediction 36 54 - -
Vra3g0035 361 PANTHER OS02G0773600 PROTEIN 47 359 - -
Vra3g0035 361 ProSiteProfiles WRC domain profile. 231 275 IPR014977 -
Vra3g0035 361 MobiDBLite consensus disorder prediction 311 329 - -
Vra3g0035 361 MobiDBLite consensus disorder prediction 276 329 - -
Vra3g0035 361 PANTHER - 47 359 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0035 Vra-Chr3 336229 339008 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0035 - - gmx:100810559 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0035 3 336229 339008 Vra3g0035 3 336229 339008 ECH
Vra3g0035 3 336229 339008 Vra8g0226 8 2752338 2755178 PCT