Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0034 ATGGACTTTGAGAAAAAAGAGAAGATGGGATCAGCACAGGAGGACCCCAATGTTTTCCACTTTAGCCATCCACATCCTTTGCAATTGCAATGCACCACCCTACCAAATATTGTAACCTGCTTTGGATGCAACATCAAAATTAACTCTGGTCACGACTATTACCAGTGCAAAACATGTGCTTTTTCTCTTCACCCTCTCTGCTACAACATGCCCTTAATCACCAACCACCCTTCACATCCAACCCACCATCTACTCCTCCTTCCTCTACCTTCCACCAAACCCACTCTCAACTGTCTCGCATGTGGCCACCGTGTCACCGCCTTTTCCTACCACTGTGCTCAATGCTCCATCTTCTTCCATGCCTTCTGTCTTGCACTCCCTCTCTCCCTCGCAATCACATCCCATCCCCACAAAATCAACCTTGAGTTTTCACCACCCTATCACTTCTTCTGTGACTTGTGCAACCACCCCAGTAATCACAACCACCGCTGGCTCTATAGATGCAACATCTGTGAATTCGACACACATATACCTTGTGCCCTTCAAAATCTGATTGGAGGGGGACCAAGTAGAGAAAATTTTGATAGTAAAACCGCTGCTGGATGGAACAAGAGATTGTACGACAGAGCTGCTGAGAGTGAGAAGATGAATAATGGTGAACTTGAATTACTGGGAAAAGAACTAAGCCCTGCTGAAGTTTTATCAAAGTTAGAAGAAAGAACACCGCTTCGGGATAAATGGACTCCACTTTCTGATCATTCACAGCTTAGTTACCAATACAGCGACTCATACTTTTCAATAGATTTGGCAAAGTCATATTCAACCCATTCAGTTCAAAAAGATGGTGCTACTAACTTTGTAAGCAATTCCGTTCCAGTTAATATTAATAAGCTGAATGCAGATATTTTCATGAAAGAAGGACCAAGAGTTATGATCAAAAATGCTAACCAAAGCCACGCTAAACGATCTGTTCAAGACCACACAATATCGGAGACAGGAAGATCCAGCTGTTCTTGTTGGAGGAAATTCCTAAACTGCTGCCTTTAG 1047 0.4336 MDFEKKEKMGSAQEDPNVFHFSHPHPLQLQCTTLPNIVTCFGCNIKINSGHDYYQCKTCAFSLHPLCYNMPLITNHPSHPTHHLLLLPLPSTKPTLNCLACGHRVTAFSYHCAQCSIFFHAFCLALPLSLAITSHPHKINLEFSPPYHFFCDLCNHPSNHNHRWLYRCNICEFDTHIPCALQNLIGGGPSRENFDSKTAAGWNKRLYDRAAESEKMNNGELELLGKELSPAEVLSKLEERTPLRDKWTPLSDHSQLSYQYSDSYFSIDLAKSYSTHSVQKDGATNFVSNSVPVNINKLNADIFMKEGPRVMIKNANQSHAKRSVQDHTISETGRSSCSCWRKFLNCCL* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0034 348 Pfam C1 domain 21 67 IPR004146 -
Vra3g0034 348 Pfam C1 domain 77 123 IPR004146 -
Vra3g0034 348 Pfam C1 domain 134 180 IPR004146 -
Vra3g0034 348 SMART PHD_3 39 84 IPR001965 -
Vra3g0034 348 SMART PHD_3 97 155 IPR001965 -
Vra3g0034 348 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 18 288 - -
Vra3g0034 348 PANTHER - 18 288 - -
Vra3g0034 348 SUPERFAMILY Cysteine-rich domain 135 182 IPR046349 -
Vra3g0034 348 SUPERFAMILY Cysteine-rich domain 49 137 IPR046349 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0034 - - vra:111241360 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0034 3 325101 327273 Vra3g0034 3 325101 327273 ECH