Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0030 ATGAGCAGCGCCATCTTCAAAGCTTCAACCAGCAATAATCTTCATTCCTCTCTCAGGGCACTCTTCCATTCAACCCCTCCCCTGCAACGTAAACGGCGCAATTTTTGGGACACCAGAGGCAACAATCATAACTCCAGAAGGTTTAGACGGATGCAAGCAAAACATAGAGTAATGAACAGTATCAATGATTATGCAGAATCCCTGTTTCAGAGCTGGAAGCAAGGTATTGATCAGGACGAGCTGCCATCAAGCCAGGACCCCTCATGGTTTCGTAAAAAGCAATATTTTGATGGGGGCTCTGGAAGGTACAGGAATGGCAAACAGGGATCAAACCATTGGTACAGAAGAGATCCTTTGTTTTGTGAAGATGATTTTGATGTGGAAACCATTTTCCGTTCTGCCTTTGGTGGGAATAGATTCTTCTATTGGTCCTTCATCAATGAGGAAAATCCTCAGTGGAGGAGGGCTGAACGCTTCTCTAATTTTGGGAGATCATGGAATTGGAGGCATGGAAGCGAAAATGATTATGACTCTTCATCCGAGCCTGATAGTCCTGGTTCAGATTTAACTCCGGATAGATTAGCACTTGGATTGAGTGCTTCTGGTCCTCTGAAACTTGAAGATGTAAAAAATGCGTACCGGGCCTGTGCTCTAAAATGGCATCCAGATCGTCATCAAGGCTCTTGCAAGGCTATAGCAGAAGAGAAGTTCAAGCTTTGCAGTGCAGCTTATCAATCTTTATGTGATAAACTGGCCTTGGATTGA 765 0.4431 MSSAIFKASTSNNLHSSLRALFHSTPPLQRKRRNFWDTRGNNHNSRRFRRMQAKHRVMNSINDYAESLFQSWKQGIDQDELPSSQDPSWFRKKQYFDGGSGRYRNGKQGSNHWYRRDPLFCEDDFDVETIFRSAFGGNRFFYWSFINEENPQWRRAERFSNFGRSWNWRHGSENDYDSSSEPDSPGSDLTPDRLALGLSASGPLKLEDVKNAYRACALKWHPDRHQGSCKAIAEEKFKLCSAAYQSLCDKLALD* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0030 254 Gene3D DnaJ domain 196 249 IPR036869 -
Vra3g0030 254 PRINTS DnaJ domain signature 213 228 IPR001623 -
Vra3g0030 254 PRINTS DnaJ domain signature 232 252 IPR001623 -
Vra3g0030 254 SUPERFAMILY Chaperone J-domain 201 250 IPR036869 -
Vra3g0030 254 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 6 253 - -
Vra3g0030 254 MobiDBLite consensus disorder prediction 173 192 - -
Vra3g0030 254 Pfam DnaJ domain 204 250 IPR001623 -
Vra3g0030 254 CDD DnaJ 206 249 IPR001623 -
Vra3g0030 254 SMART dnaj_3 190 252 IPR001623 -
Vra3g0030 254 ProSiteProfiles dnaJ domain profile. 191 252 IPR001623 -
Vra3g0030 254 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 6 253 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0030 - - gmx:100807880 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0030 3 290852 297334 Vra3g0030 3 290852 297334 ECH