Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0027 ATGTCAATTATTGTTTCACTTCCAATGGAGACTGCTAAGGTTCAACATGTAACCAAAAGATCTTCGGATGAGCTTCTGAAGAAGTTTGCAGAAGTGGGTTGTGACGAAGGTGGAAAAAGGAGAAGGAAGAAGAGGAGAGAACATGAATTGTGTGACTTTGACAGCCCTTCAACAGGTAGTGCCGCCGTCGTCGAAAGGAGGTCCCTTCTGCTGCCCAAGTTGACACGCAGGTCGGTGCTGCTCCGGCAGCTCAGGGTCAGAAACAACTCATCACTCTTTCGAAACATTCATAAGACATGGCGTAGAACCATTGAAGGTGCATCCAAAGTTTTCTTGGAAAAGCATTATCATCGTCATAAGCGTTTGATCAATGACAGTGTTTAG 384 0.4531 MSIIVSLPMETAKVQHVTKRSSDELLKKFAEVGCDEGGKRRRKKRREHELCDFDSPSTGSAAVVERRSLLLPKLTRRSVLLRQLRVRNNSSLFRNIHKTWRRTIEGASKVFLEKHYHRHKRLINDSV* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0027 127 PANTHER EXPRESSED PROTEIN 8 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0027 Vra-Chr3 264841 265790 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0027 - - gmx:100780602 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0027 3 264841 265790 Vra3g0027 3 264841 265790 ECH
Vra3g0027 3 264841 265790 Vra8g0233 8 2859190 2874571 PCT