Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0024 ATGCAGGGAGGAAAGAAAACAGGAGAATCCATGATGGAAAAGGTTTCAAACATTGGTGCTTGTGCAAAAGCTGGCATGGAGAAGACCAAGGCCACTGTCCAAGAGAAGGTAGAAAGAATGACAGCACGTGATCCGTTGCAAAAGGAATTGGCAACCCAGAAGAAGGAAGCTAAGGTCAACCAGGCTGAGTTGGACAAGCTGGCGGCGCGTGAACATAACGCTGCGGTGAGTGAGCATAACTCGGCGGCGAAACAGGGGACCACCTACTCCACCACCGGGGAGCATGGTCATCCCACGGGATTCCACCAGATGTCGGCGATGCCAGGTCACGGGACTGGGCAGCCCACGGGCCACGTGACTGAAGGAGTGGTGGGCTCGCATCCCATTGGGACGAATCGAGGCCCGGGAGGCACAGCTACGGCCCGTAATACCCGTGCAGGTGGAAACCCGAATGATTATGGGTATGGGACTGGAGGTACTTACAGTTAA 489 0.5542 MQGGKKTGESMMEKVSNIGACAKAGMEKTKATVQEKVERMTARDPLQKELATQKKEAKVNQAELDKLAAREHNAAVSEHNSAAKQGTTYSTTGEHGHPTGFHQMSAMPGHGTGQPTGHVTEGVVGSHPIGTNRGPGGTATARNTRAGGNPNDYGYGTGGTYS* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0024 162 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 1 161 IPR005513 GO:0009793
Vra3g0024 162 Coils Coil 50 70 - -
Vra3g0024 162 MobiDBLite consensus disorder prediction 78 98 - -
Vra3g0024 162 PANTHER 18 KDA SEED MATURATION PROTEIN-RELATED 1 161 - -
Vra3g0024 162 MobiDBLite consensus disorder prediction 38 57 - -
Vra3g0024 162 Pfam Late embryogenesis abundant (LEA) group 1 9 76 IPR005513 GO:0009793
Vra3g0024 162 MobiDBLite consensus disorder prediction 71 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0024 Vra-Chr3 240083 240995 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0024 - - gmx:547828 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0024 3 240083 240995 Vra3g0024 3 240083 240995 ECH