Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0010 ATGGTGGACGCAGCAGAACGTAGGTACTTGGAGGATGAAGATACGCCATTCATGAAAACTATCAAGGGTGCAACAACTGGTTTGGTTGCTGGCACTATCTGGGGTACTGTGGTTGCCACCTGGTATGATGTCCCTCGTGTTGAGAGAAGTGTTGCCCTTCCGGGGCTGATTAGGACTTTCAAGATGATGGGCAACTATGGTTTGACCTTTGCTGCCATAGGAGGAGTCTACATAGGTGTAGAGCAGTTGTTGCAGAACTATAGGATGAAGAGGGATCTAGTCAATGGAGCTGTTGGCGGATTTGTTGCGGGTGCAACTATTCTGGGTTACAAAGGAAGGAGCATCAAAACTGCACTCTCTGCTGGATCGGCATTAGCATTCACATCTGCATATATTGATTTCGGTGGTCAAACATTAAAACATGACGAGGGGAAAGAGTATGCCGCTTACACAACAAAGAAAAGAACCAGTGGTGATGAATAA 483 0.4638 MVDAAERRYLEDEDTPFMKTIKGATTGLVAGTIWGTVVATWYDVPRVERSVALPGLIRTFKMMGNYGLTFAAIGGVYIGVEQLLQNYRMKRDLVNGAVGGFVAGATILGYKGRSIKTALSAGSALAFTSAYIDFGGQTLKHDEGKEYAAYTTKKRTSGDE* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0010 160 Pfam Tim17/Tim22/Tim23/Pmp24 family 18 127 - -
Vra3g0010 160 PANTHER OUTER ENVELOPE PORE PROTEIN 16-3, CHLOROPLASTIC/MITOCHONDRIAL 4 157 - -
Vra3g0010 160 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 4 157 IPR039175 GO:0042721|GO:0045039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0010 K17790 - gmx:100499840 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0010 3 115848 120385 Vra3g0010 3 115848 120385 ECH