Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0006 ATGACGGAACCAACGGAGCCATCCACCTCATCTTCATTGGCGAGGGACCCAAGCACTGTGATTCACCCAAGGCGCGAGCCCTTCGAGCACGGTCTCTTGCCAATCCCACGACTCATCTTCTCCGACCCCGCGCAAACCCTAATTCCGTTGAAACAGAAGCTTCTACAGTTATCCTCCAACCAGCGAGTCGACTCGGTGGCCATCTCCGACTCACTTCAGATCTCCATTGAGCACGCCAGGCTCGTCCTCGACACCCTCGCCTCGATTCTGCACTCCGACTCCGAACCTCTCACCACCGCCAAGTTCGGAGAAATCGATTCCGTCGGCGTCGACGTGCATGATCTGGTATTGTTTCTCTACATTCAATCCTACAAGAGACTCCTCCCGCGGACGCACAAGGATTCCGCCGCAATCGCCGATGTCTGGCCTTCTACTTCCGCCTTCGATGGCTACTTGTCCGCTCTCTCGCCGCTTCAGCTTGTACGCAGCAACAGTCGGCGTTTTATGCCTTCTCAGGCCGATGAAGAGGCACATCAATTGTCGTATCTGCAAAAACACTTGGCTAACATAATGTCTCTTTTAGCAGAGCCTGTAGAGGGAGAAGGCGAAGAGTCTCTGGTTTTAACAATGGATAGATTCGAGCATCTTGGGTTTCTATTTCAGTTTGGTGATAAGGGATTGGAAGGAAATTCTTTTAGTCAATGTTCTCCTTTTTTTGCAAACTCAGACCCTGACATGCCTGCTGTTCCTGTTCCTGCTGCACAAGTTCATGATTGGCTTCTGCAGAACATAGTGGCTACTTTGGAATATATTTCTGAACGAACTTCTTCTAAGGAAAATGGCCCATCTAGTGCCTCTGATCAGGATGTTGCCATGACTGATGCAAGTACTGTGTCAGTTAAGGTTTCAACTAGTAATAGAGGTGCTAGTTTCATTGAAGGGATATCTAAATCATCATATACAAAGAATGCATCTGACATAAAAGGTTCTTCAGTGAAGGTTCTTAATTGCCACGAGTCTGCCATCTACATCCTAGCACCAGTGAGATACGCCACTGTCTATGGATGTTCGGATGCAACAATAGTTCTTGGAGCAGTTGGCAAGGCTGTGAGAGTAGAACACTGTGAGCGTGTTCATGTAATTGTAGCAGCAAAACGTATTTGTATTGCTAATTGCCGTGAATGTATTTTCTTCTTGGGAGTGAATCAGCAACCACTTATGCTTGGTGATAACCATAAGCTGCAGGTGGCTCCCTATAATACTTTTTACTCCCAATTGGGGGAGCATATGAATGAAGTTGGAATTGTTCCTACAGTGAACCGATGGGATGAACCTCTTCCATTGGGCATGGTCGATCCTCATGATTCGTTATCTCATCCAGCAGGTGGCTCTGATGTTCAAGCTGAGTGTGCTACCCAGGTGGACCCTGATCAGTTCACTAGTTTTGTGATTCCGAGCTGGCTTGGAGGAGACTCCACTGGGTCTGCAGAAGGCAATCCATTCACGCTACCAGATGCTTACAAGGCATCTCAGCATAAAAATCACAAAAATTTAGGGGAGATAAGGCAACTGATAAGGGAAGCATCTTTAGAAGAAAGTCGCAAACGAGAGTTGTCAACTGCACTCCATGTGTACTTCAAGGACTGGTTATATGCTTCTGGAAACATTCGTCAGCTTTATTGTCTACAAGGCGATTGA 1698 0.4717 MTEPTEPSTSSSLARDPSTVIHPRREPFEHGLLPIPRLIFSDPAQTLIPLKQKLLQLSSNQRVDSVAISDSLQISIEHARLVLDTLASILHSDSEPLTTAKFGEIDSVGVDVHDLVLFLYIQSYKRLLPRTHKDSAAIADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLANIMSLLAEPVEGEGEESLVLTMDRFEHLGFLFQFGDKGLEGNSFSQCSPFFANSDPDMPAVPVPAAQVHDWLLQNIVATLEYISERTSSKENGPSSASDQDVAMTDASTVSVKVSTSNRGASFIEGISKSSYTKNASDIKGSSVKVLNCHESAIYILAPVRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKRICIANCRECIFFLGVNQQPLMLGDNHKLQVAPYNTFYSQLGEHMNEVGIVPTVNRWDEPLPLGMVDPHDSLSHPAGGSDVQAECATQVDPDQFTSFVIPSWLGGDSTGSAEGNPFTLPDAYKASQHKNHKNLGEIRQLIREASLEESRKRELSTALHVYFKDWLYASGNIRQLYCLQGD* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0006 565 MobiDBLite consensus disorder prediction 1 20 - -
Vra3g0006 565 PANTHER UNCHARACTERIZED 14 565 IPR039589 -
Vra3g0006 565 PANTHER BNAC04G02540D PROTEIN 14 565 - -
Vra3g0006 565 MobiDBLite consensus disorder prediction 1 17 - -
Vra3g0006 565 Pfam Tubulin binding cofactor C 329 444 IPR012945 -
Vra3g0006 565 Gene3D - 309 459 IPR016098 -
Vra3g0006 565 SMART carp 337 374 IPR006599 -
Vra3g0006 565 SMART carp 375 409 IPR006599 -
Vra3g0006 565 ProSiteProfiles C-CAP/cofactor C-like domain profile. 299 435 IPR017901 -
Vra3g0006 565 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 328 400 IPR036223 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0006 Vra-Chr3 86173 97463 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0006 K16810 - gmx:100780410 1013.45