Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0002 ATGGTAACTGTGTTAAAATTGTGGTTTGTGACGCTGCTGTTGTTGTCCCCAGTTGCATTGTCTGAACTGTGCAACCCACACGACAAGAAAGTGTTGCTGCAAATCAAGAACGACTTAAACAACCCTTACCTTCTAGCATCCTGGAACCCCGACACAGATTGCTGCCAATGGTACTGCGTCGAATGCCACCCCAAAACGCACCGCATCACCTCCCTCGTCATTTTATCCTCCGTTCCCGAAACCAATTTCTCAGGCCAAATACCACCCTCCGTCGGTGACCTACCCTACCTAGAGACCCTCGAATTCCACAAGCTTCCTAAACTCACCGGCCCAATCCAGCCCACCATCGCTAAGCTTACTAACCTCAAGGAGCTCTATATTAGCTGGACCAACATCTCCGGCCCAGTACCCGATTTTCTGGCCCAACTCACCAATCTCCAGTTTCTCGACCTTTCCTTTAATAACCTCTCCGGCCCCATACCGAGCTCGCTTTCCCGGTTGCCCAACCTGTTGTCCTTGCGCCTCGACCGGAATAAGCTCACTGGCCCAATCCCGGATTCCTTTGGGTCATTCAAGAGGCCTGGCCCAAGCCTTGTGCTGTCTCACAACCAGCTTTCTGGGGCCATTCCGGCTTCCCTGGCCAACATAGACCCGCAACGGATAGACTTTTCAAGGAACAAACTGGAAGGCGACGCTTCCATGCTTTTCGGGAGCAACAAAACGACGCAGATGGTTGACGTTTCGAGGAACTTGTTGGCGTTTGATTTATCCAGAGTGGAGTTTCCCACCAGCTTGATATCGTTGGATTTGAATCACAATAAGATCACCGGAAAGATTCCAGTGGGATTGACCGCAGTAGATTTTCTGCAGGGGTTCAACGTGAGCTATAATCGACTATGTGGTGAGATCCCGCAGGGAGGAAGACTGCAGAAGTTTGACGTGGATTCCTATTTTCATAACAAGTGCTTGTGTGGATCACCCCTTCCCAGTTGTAACTGA 999 0.5055 MVTVLKLWFVTLLLLSPVALSELCNPHDKKVLLQIKNDLNNPYLLASWNPDTDCCQWYCVECHPKTHRITSLVILSSVPETNFSGQIPPSVGDLPYLETLEFHKLPKLTGPIQPTIAKLTNLKELYISWTNISGPVPDFLAQLTNLQFLDLSFNNLSGPIPSSLSRLPNLLSLRLDRNKLTGPIPDSFGSFKRPGPSLVLSHNQLSGAIPASLANIDPQRIDFSRNKLEGDASMLFGSNKTTQMVDVSRNLLAFDLSRVEFPTSLISLDLNHNKITGKIPVGLTAVDFLQGFNVSYNRLCGEIPQGGRLQKFDVDSYFHNKCLCGSPLPSCN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0002 332 Pfam Leucine Rich Repeat 145 167 IPR001611 GO:0005515
Vra3g0002 332 Gene3D Ribonuclease Inhibitor 22 332 IPR032675 -
Vra3g0002 332 SUPERFAMILY L domain-like 23 330 - -
Vra3g0002 332 PANTHER POLYGALACTURONASE INHIBITOR 2 5 331 - -
Vra3g0002 332 Pfam Leucine Rich repeat 263 278 IPR001611 GO:0005515
Vra3g0002 332 PANTHER POLYGALACTURONASE INHIBITOR 1 5 331 - -
Vra3g0002 332 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0002 Vra-Chr3 6631 7847 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0002 6 332 Receptor kinase-like Gene Family AT3G56370 32.641 1.14e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0002 - - gmx:100799184 583.563