Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1623 ATGTCAACTGTCTTCTCAGCTGGAACCCTTTCCCCTCTACGGTCGCTATCCTCTACACTAAAATTTTCTGATGTTTACCCTTTCAAATTTCATCCAAATGGGTACCATCCAATTCTCTCCAAATCCAGGTCACAGTCCCTAATTGCCAACTCTTTGCTATCTGATAAGTTTCCGACGGTGGCTGCCCCATCAGTAGGGCCTATTCCTCCGTCTCAGCTCATTGAAGTCGTTAAAACTGCAGCAAATACTGGCGCTCAGGTTGTGATGGAAGCAGTCAATAAGCCTCGAAATATTACATATAAAGGATCAACTGACTTGGTGACCGAGACTGATAAAATGAGTGAAGCTGCCATATTAGAAGTGGTGAAAAAGAATTTTGATGATCATCTTATTCTTGGGGAAGAAGGAGGAGTTATAGGAGATACGGCATCTGATTATCTCTGGTGCATCGATCCTTTAGACGGAACAACAAACTTTGCACATGGTTATCCGAGCTTTGCTGTCTCTGTTGGAGTTCTATATCGAGGGAAGCCTGCTGCTGCTGCAGTGGTTGAGTTTGTAGGAGGTCCTATGTGTTGGAATACTCGCTTATTCTCTGCAACTGCAGGTGGTGGAGCATTTTGTAATGGCCAAAGGATTCAAGTGAGCGCAACTAATCAGGTGGAACAATGTCTTCTAGTGACAGGCTTTGGGTATGATCATGATGATGCATGGGCTACTAACATCGACTTATTCAAAGAATTTACAGATGTCAGCAGGGGTGTAAGACGGCTTGGTGCAGCTGCTGTGGACATGTGTCATGTAGCATTAGGAATTGTAGAAGCTTATTGGGAATATCGTCTAAAGCCATGGGATATGGCTGCTGGTGTTTTGATGGTTGAAGAAGCTGGTGGCACAGTTTCTCGGATGGATGGAGGAAAATTTTGTGTTTTTGATAGATCTGTTTTGGTTTCGAACGGCCTGCTCCATACAGAGCTTTTGAACAGAATTGGACCTGCAACAGAGAAATTAAAAAACAAGGGAATTGATTTTTCATTGTGGTATAAACCGGAGAACTACAGGGCAGACGTTTAA 1074 0.4348 MSTVFSAGTLSPLRSLSSTLKFSDVYPFKFHPNGYHPILSKSRSQSLIANSLLSDKFPTVAAPSVGPIPPSQLIEVVKTAANTGAQVVMEAVNKPRNITYKGSTDLVTETDKMSEAAILEVVKKNFDDHLILGEEGGVIGDTASDYLWCIDPLDGTTNFAHGYPSFAVSVGVLYRGKPAAAAVVEFVGGPMCWNTRLFSATAGGGAFCNGQRIQVSATNQVEQCLLVTGFGYDHDDAWATNIDLFKEFTDVSRGVRRLGAAAVDMCHVALGIVEAYWEYRLKPWDMAAGVLMVEEAGGTVSRMDGGKFCVFDRSVLVSNGLLHTELLNRIGPATEKLKNKGIDFSLWYKPENYRADV* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1623 357 ProSitePatterns Inositol monophosphatase family signature 1. 148 161 IPR020583 -
Vra2g1623 357 Gene3D - 214 338 - -
Vra2g1623 357 PRINTS Lithium-sensitive myo-inositol monophosphatase family signature 84 103 IPR020552 GO:0046854
Vra2g1623 357 PRINTS Lithium-sensitive myo-inositol monophosphatase family signature 205 223 IPR020552 GO:0046854
Vra2g1623 357 SUPERFAMILY Carbohydrate phosphatase 69 334 - -
Vra2g1623 357 ProSitePatterns Inositol monophosphatase family signature 2. 284 298 IPR020550 GO:0046854
Vra2g1623 357 Pfam Inositol monophosphatase family 72 327 IPR000760 GO:0046855
Vra2g1623 357 CDD IMPase 73 319 IPR033942 GO:0008934|GO:0046855
Vra2g1623 357 PRINTS Inositol monophosphatase superfamily signature 105 125 IPR000760 GO:0046855
Vra2g1623 357 PRINTS Inositol monophosphatase superfamily signature 127 143 IPR000760 GO:0046855
Vra2g1623 357 PRINTS Inositol monophosphatase superfamily signature 148 164 IPR000760 GO:0046855
Vra2g1623 357 PRINTS Inositol monophosphatase superfamily signature 203 226 IPR000760 GO:0046855
Vra2g1623 357 PRINTS Inositol monophosphatase superfamily signature 250 271 IPR000760 GO:0046855
Vra2g1623 357 PRINTS Inositol monophosphatase superfamily signature 281 305 IPR000760 GO:0046855
Vra2g1623 357 Gene3D - 70 213 - -
Vra2g1623 357 PANTHER PHOSPHATASE IMPL1, CHLOROPLASTIC 51 355 - -
Vra2g1623 357 PANTHER INOSITOL MONOPHOSPHATASE 51 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1623 Vra-Chr2 24296520 24310917 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1623 K01092 - gmx:100796770 634.024