Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1621 ATGACGAACTTAGTAGAGCAAGAGGGTGATGCTAGCGAGGAAACTTTCACTTTGGAGCTACCTGCTCCACCTGGTTGGAAGAAGAAGTTCGTCCCAAAGAAAGCTGGTACTCCAAAAAAAAATGAGATTGTGTTCACTGCACCAACAGGAGAGGAGATCAACAACAGGAAGCAGTTGGAAAAATATTTGAAGGCACACCCTGGTGGTCCGGCTGTATCAGAATTTGATTGGGGCACTGGTGAGACCCCAAGAAGATCTGCAAGAATCAGTGAGAAGGCGAAGGCAGCTCCTCCAACAGAAAGCGAACCCCCAAAGAAACGTAATAAAAGAACACCAGCTTCGCAGAAAGAAACTTCCCAGAAGGAAAAAGAAGAGGACACAAAGGAAATGGAGATGCAAGCAGATGATGAAATCGCTAAGGTTGATGAAGATATAGAGAAGGAAAATAATGTGGTAACGGAAAATCAAGATGACAAGACTGCAGAAGATACAAATATCAACAAATCAACTAACCATGGAGATGCTAAAGCTGGAGAAAACGTTGAGGTACGTAATGATGAGGAAAAATCCAATGCTGCTGATGGAGAATTACACGCATTGAAAGATGAAGTTGTTGACAAAGGAACTGAGGGTGCAGTTTCTCTGAGAAATGATGAAGAAAAGATTGGGCAACCACGGGAAGAGACAAAAGAATATCACAGGTCTGGGGAGCCCGAGAAATCTGAAACATGCAGTACTGCTGACAAAACAGTTGAAGTGGAAGCAGTGAATACAGAAGAATACATCAAGAGTACTAGTAAACTTGAAGAAGTTGAGAAAATAGAAGGAACGAAAGTGAATAGTGAAGAACATGACAAGCTTGATGAGATAAATAAGAAGGTTGAAGCTGAGTTGACTGAGAATGGCAATCATGGGAGTTGA 921 0.4213 MTNLVEQEGDASEETFTLELPAPPGWKKKFVPKKAGTPKKNEIVFTAPTGEEINNRKQLEKYLKAHPGGPAVSEFDWGTGETPRRSARISEKAKAAPPTESEPPKKRNKRTPASQKETSQKEKEEDTKEMEMQADDEIAKVDEDIEKENNVVTENQDDKTAEDTNINKSTNHGDAKAGENVEVRNDEEKSNAADGELHALKDEVVDKGTEGAVSLRNDEEKIGQPREETKEYHRSGEPEKSETCSTADKTVEVEAVNTEEYIKSTSKLEEVEKIEGTKVNSEEHDKLDEINKKVEAELTENGNHGS* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1621 306 MobiDBLite consensus disorder prediction 63 252 - -
Vra2g1621 306 MobiDBLite consensus disorder prediction 1 51 - -
Vra2g1621 306 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 12 82 IPR001739 GO:0003677
Vra2g1621 306 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11-LIKE 10 305 - -
Vra2g1621 306 SUPERFAMILY DNA-binding domain 10 110 IPR016177 GO:0003677
Vra2g1621 306 MobiDBLite consensus disorder prediction 175 247 - -
Vra2g1621 306 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 10 305 IPR039622 -
Vra2g1621 306 MobiDBLite consensus disorder prediction 98 128 - -
Vra2g1621 306 Pfam Methyl-CpG binding domain 18 81 IPR001739 GO:0003677
Vra2g1621 306 MobiDBLite consensus disorder prediction 143 165 - -
Vra2g1621 306 Coils Coil 183 203 - -
Vra2g1621 306 Gene3D - 13 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1621 Vra-Chr2 24269810 24278107 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1621 - - gmx:100814375 434.106