Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1617 ATGGCGAGAGAGCTTCTCGCACGCAATCTGGGTCAATGGATCTCTGTGTTTTTGCTGTTACTTTTTCATGTCAATTTCGGAACTTGTTTTTACCTTCCTGGTGTTGCACCCGAGGATTTCCACAAGGGGGATCTGTTGAGGGTGAAAGTGAACAAACTATCTTCAACAAAAACACAGCTTCCTTACTCCTACTACTCACTGCCTTATTGTCATCCAGATCGCATTGTTGACAGTGCAGAGAATCTTGGGGAAGTCCTTAGGGGTGACCGCATAGAAAACTCTCCTTACGTGTTCAAAATGAGAGAACCCCAGATGTGCAATGTTGTTTGTCGCCTAATTCTCGATAAAAAATCAGCCAACGAGTTCAAGGAAAAGATAGATGATGAATATCGAGTAAACATGATTTTAGACAATCTTCCTTTGGTTGTCCCACTGAGACGACCAGACCACGAATCATCCTTGGTTTATCTGCATGGCTTCCTCGTTGGCCTTAAAGGACAGTATGCAGGAAACAAGGATGAAAAGCATTTTGTCCACAACCATTTAACATTCATAGTTAAGTATCACAGAGATCCAGTGACAGAGATGTCCAGGATAGTAGGCTTTGAGGTTAAGCCTTTCAGTGTAAAGCATGCATACGAAGGTGAGTGGGAAAATGACACGCGCTTAACTACATGTGATCCTCATGCAAAAAGGTTAGTCTCAGGCTCTGAGCCTCCTCAAGAGGTTGAAGACAAAAAGGAGATTATTTTTAGCTATGATGTTGAGTTCCAGGAAAGTAATTTGAAGTGGGCATCTCGCTGGGATTCCTATCTACTGATGGCCGATGATCAAATTCATTGGTTTTCAATTGTTAATTCTTTGATGATTGTACTTTTCCTATCGGGTATGGTGGCTATGATAATGTTGAGGACACTTTACAGAGACATCTCAAAGTACAATCAATTAGAGACACAGGAAGAAGCTCAGGAAGAGTCAGGGTGGAAGCTTGTTCATGGGGATGTTTTCAGGCCTCCTCCCAATTCAGATCTACTATGTGTATATGTTGGAACAGGTGTTCAATTTTTCGGAATGATTCTTGTCACAATGATCTTTGCAGCACTTGGATTCTTGTCTCCCTCAAACAGAGGAGGGTTGATGACTGCAATGCTCTTGCTCTGGGTGCTTATGGGATTGGGTGGTGGCTATTCTTCAGCTCGTCTTTATAAAATGTTCAAGGGACCACAATGGAAGAAAATTGCTCTCAAGACAGCTTTTATGTTTCCTGCCTCTGCTTTTTCAATTTTCTTTGTGTTAAACGCTCTAATCTGGGGACAGAAATCTTCTGGGGCTGTCCCGTTTGGTACAATGTTTGCTCTTGTTTTCTTATGGTTTGGAATCTCAGTTCCATTGGTGTTTCTTGGTGGTCACTTTGGCTATAAAATGCCACTGGCTGAAGATCCTGTGAAGACAAACAAGATTGCTAGGCAGATCCCAGATCAGACTTGGTACATGAATCCAACGTTTTCTGTTCTGATAGGAGGCGTGCTTCCATTTGGTGCTGTCTTCATTGAGCTTTTCTTCATTCTCACGTCAATATGGTTACATCAGTTTTATTACATATTTGGTTTCCTGTTCATTGTGTTCATCATCCTCATCGTTACCTGTGCTGAGATTACAATAGTTCTCTGCTACTTCCAGCTGTGTAGTGAGGACTACCGTTGGTGGTGGAGGTCATATCTCACTTCTGGTTCATCTGCACTCTACCTTTTCCTCTATGCTGCATTTTACTTTTTCACAAAGCTTGAGATCACAAAACCAGTATCTGGAGTCTTGTATTTTGGATACATGCTGCTTCTTTCCTATGGATTCTTCGTGCTCACTGGTACAATTGGTTTCTATTCATGCTTCTGGTTCATAAAACTAATCTACTCTTCAGTTAAAATTGACTGA 1932 0.4172 MARELLARNLGQWISVFLLLLFHVNFGTCFYLPGVAPEDFHKGDLLRVKVNKLSSTKTQLPYSYYSLPYCHPDRIVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVVCRLILDKKSANEFKEKIDDEYRVNMILDNLPLVVPLRRPDHESSLVYLHGFLVGLKGQYAGNKDEKHFVHNHLTFIVKYHRDPVTEMSRIVGFEVKPFSVKHAYEGEWENDTRLTTCDPHAKRLVSGSEPPQEVEDKKEIIFSYDVEFQESNLKWASRWDSYLLMADDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNQLETQEEAQEESGWKLVHGDVFRPPPNSDLLCVYVGTGVQFFGMILVTMIFAALGFLSPSNRGGLMTAMLLLWVLMGLGGGYSSARLYKMFKGPQWKKIALKTAFMFPASAFSIFFVLNALIWGQKSSGAVPFGTMFALVFLWFGISVPLVFLGGHFGYKMPLAEDPVKTNKIARQIPDQTWYMNPTFSVLIGGVLPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFIILIVTCAEITIVLCYFQLCSEDYRWWWRSYLTSGSSALYLFLYAAFYFFTKLEITKPVSGVLYFGYMLLLSYGFFVLTGTIGFYSCFWFIKLIYSSVKID* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1617 643 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 14 643 - -
Vra2g1617 643 Pfam Endomembrane protein 70 61 599 IPR004240 GO:0016021
Vra2g1617 643 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 14 643 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1617 Vra-Chr2 24226178 24229360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1617 15 643 Miscellaneous Gene Families AT5G10840 78.571 0.0 1021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1617 K17086 - gmx:100804564 1184.09