Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1614 ATGAAGGAGGTGCTGTTGGGTGGGGGAGATAAGATTGAGAGGAAGAAAGCGAGGGTGGTTTGGGAAGGGTTGATGATGATGGGTCTCAAAGGGGAGAGTAACAGCAAGCTGAGGAATTCGATGGTGGTGTCATCGTCGTCGTCGAGGTCGTCGAGGATGAAGCTGTGGATGATACGTGCGACCACATCGGTGTTGCTATGGACCTGCGTCGTTCAGTTAACGGCGTTGGGTGACGTGTGGGGGCCTAGAGTCTTGAAAGGGTGGCCTTCGTGTTTCACTTACGAATCTGCGCTCACTGAGTTGCCGTCTTCTACCCCTGTAGTGCTCCCACCCAAGAGGGTGTATAAGAACAATGGTTACTTGATGGTGTCGTGCAATGGAGGACTGAACCAAATGAGAGCAGCGATATGTGACATGGTGGCTATTGCAAGGTATTTAAACGTGACACTTATAGTGCCGGAATTGGATAAAACGTCCTTTTGGGCTGACCCCAGTGAGTTCCAAGACATCTTTGATGTGGATCATTTCATTACATCCTTGAGGGATGAGGTTCGGATATTGAAAGAGTTGCCTCCTAGACTGAAGACGAGAGTGGAGAAGGGATTACTTTACACCATGCCACCGATTAGTTGGTCTGATATATCATACTATAAGAACCAGATTCTGCCTTTGATACAAAAGTACAAAGTCGTCCATTTAAATCGAACTGATGCTCGGCTGGCCAATAACGAACAACCTTTGGAGATTCAGAGGCTGCGATGCAGAGTCAATTTTAGTGCTCTTAGATTTACTTCTCAGATTGAGGACTTAGGCAAAAGGGTGATCAAGCTTCTGANGNAAAAAGGCCCATTTNTGGTGCTTCATCTCAGGTATGAAATGGACATGTTGGCATTTTCAGGCTGTACACAAGGTTGCAACAGTGATGAGGTGGAAGAGTTGACAAGGATGAGATATGCTTATCCTTGGTGGAAAGAAAAAATAATTAATTCTGATTTGAAGAGAAAGGATGGTCTGTGTCCTTTAACACCTGAGGAGACTGCTCTTACACTTAGGGCCCTTGACATCGATAGAAACATTCAGATCTACATTGCAGCTGGGGAAATATACGGTGGAAACAGGAGAATGGCAAGTCTTGCGGAGAACTATCCAAGACTGGTCAGAAAGGAAACACTGTTGGAACCATCGGACCTTCAGTTCTTCCAAAATCATTCCTCTCAGATGGCAGCATTGGATTACCTTGTCTCACTTGAGAGTGATATTTTTGTTCCTACATATGATGGAAATATGGCCAAAGTAGTTGAGGGACATCGGAGATATCTTGGATTCAAGAAGACGATTTTGTTGAACAGAAAGCTCCTAGTTGATTTGATAGATCAGTACCATAATGGAGAATTGAACTGGGAGGAATTCTCTTCAGCTGTGAAGGAAGCTCATGCTGATCGCATGGGCAGTGCAACTAAAAGATGGGTAATCCCTGACAGGCCCAAAGAAGAGGACTATTTCTACGCCAATCCAGAGGAATGTTTAGAACTATCAGATGATATTAAGATAGGTCTCCATGAAGTTTAG 1569 0.4468 MKEVLLGGGDKIERKKARVVWEGLMMMGLKGESNSKLRNSMVVSSSSSRSSRMKLWMIRATTSVLLWTCVVQLTALGDVWGPRVLKGWPSCFTYESALTELPSSTPVVLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKTSFWADPSEFQDIFDVDHFITSLRDEVRILKELPPRLKTRVEKGLLYTMPPISWSDISYYKNQILPLIQKYKVVHLNRTDARLANNEQPLEIQRLRCRVNFSALRFTSQIEDLGKRVIKLLXXKGPFXVLHLRYEMDMLAFSGCTQGCNSDEVEELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALTLRALDIDRNIQIYIAAGEIYGGNRRMASLAENYPRLVRKETLLEPSDLQFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRYLGFKKTILLNRKLLVDLIDQYHNGELNWEEFSSAVKEAHADRMGSATKRWVIPDRPKEEDYFYANPEECLELSDDIKIGLHEV* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1614 522 CDD O-FucT_plant 120 445 IPR024709 -
Vra2g1614 522 Pfam GDP-fucose protein O-fucosyltransferase 120 440 IPR019378 -
Vra2g1614 522 PANTHER OS02G0726500 PROTEIN-RELATED 37 514 - -
Vra2g1614 522 PIRSF UCP009360 18 506 IPR024709 -
Vra2g1614 522 PANTHER GDP-FUCOSE O-FUCOSYLTRANSFERASE-LIKE PROTEIN 37 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1614 Vra-Chr2 24175338 24179145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1614 116 509 Miscellaneous Gene Families AT2G37980 49.747 1.09e-129 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1614 K23280 - gmx:100778901 926.391