Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1608 ATGTCGGAGAGCAACCACACGGAAATCCAAATCCGTGCCCTAACCGGCGAATCAGTCACTCTTCTCGTCACTCCCACCACAACCCTCCACCACCTGAAGCTTCTCCTCCGCCATTCATTCCCCCCCGCCACCACCTCCCCCAATTTCCACCTCTTTTTCAAGGGTGAGAAATTGCGATTGCAGACTCAAATTGCCTCTTACCCCATCCAACGTGACGAGTTTCTCGTCCTCATCCCCTTCACCAAAAAGGAAAAGGAACCTTCTAGAACATCCGAATTTCTTCTGCCTAATGTTCCTCACACTACCAATGCTTCAAGTTCGACATCTGAACTCGCGGATTCTACGTGGTCCTCCATAAAGGAGGATTTATCACTTTTACGTGATGCTACTGAGAGTAATGCGTCTAATTCCGAGTCAGGAAATGAAAAACCGTTGGAGACCTCAACCGAAAGGGGTTTAAGTCGTGAGAAGCAGATGGAGCTTCCCTATCATCTTATACTGAACACATTGCGAGATGGTAGCGAGGGTGGTCCACTTGGCGAGCACAATTGCGAGGTTTTCGCGAAGGTTTTGGAATCCGTGAATTGTTTATCGGAACTGCCTCTCGGACACTGCAAGTTGCTGAAACGAGCTCGTTCGAAAGAAGGTGGTGGAGGCGGCGGCGGCCTGAGAAAACGTGTCAGTGACGGTGTTATATGTTTGTGTCCACCGTGGTTGAAGATAGTGGTGAAGGCGTTTGCATTTGTGAACATTTTTTCCGCGTTTATTTATTTGCAACTTCGAGATTTGACCTCGAGTCTGCTGGAGGAGGCGCTTAGTGAGCTTGCTAAGTTTGGGGTTAAACTTGGCCTCGGTGACATCAAGAATCTTTCGCTTCTCTGTCCTCATATGGTATGTTTCAGGGATGATGTAGAGAAGACAAGTTTTGGTGATAACATTGTTGTCCTTAATCATTCAACAGACAATAAAGATATAGTTGAAGAAAATCCTAAAAGAGTGCGCAAGTGGTTGTATATTTCAAAGACTGTCAGTACATTGAAGAGAAGGGACAGTTCTTTCCGTAAATTTCTAGGACGGGCTTTTGAACAGCTGCCGTATGAATTTGGAGATGAGATGACTGTGGGGATTTCCTTGGAAGAGTTGCTTGTTGCAGTCAAGGACAATGATTTTGTCAAAAAAGAAGACAAACCCAAACGTGTAAAGAGAAACAAAACTACCTCAAAATCTGACCTAAACCATATTGGGTGTCATGACACAAAGTCATTAACGGCTGTAGAGATGATTGATCATCTTAAGAAAGGAATTGGATCAGAAGGGCAGATTGTGCATATTGAAGACATATGTGCCAGGAAAGCAATTTACAGCGAGATCCCTATTGATCTATCAGAGAAAATGAGATCTGCACTGAAGTGTATCGGAGTTTCCAAATTTTACTGTCATCAGGCAGAGTCTATACAAGCTTCTCTTCATGGTGAAAATGTTGTTGTGGCTACAATGACATCTAGTGGCAAATCCCTTTGCTATAATCTACCAGTTCTAGAAGTTTTGTCTACGAATTCATCTTCATGTGCTTTGTACATATTTCCCACAAAGGCATTAGCTCAAGATCAACTAAGAGCTTTGTTACACATGACAAAAGGATTTGATAACGACTTTAATATTGGTATATATGATGGTGATACTTCTCAGAGTGAGAGGATGTGGCTCCGTGATAATTCTAGATTGTTGATCACAAATCCAGATATGTTACACATATCAATCTTGCCCCATCATCAACAGTTTAGTCGAATTTTATCAAACCTAAGGTTTGTGGTAATTGATGAAACTCATACTTACAAGGGAGCGTTTGGAAGTCACACCGCCCTTATTTTGAGGAGGCTAGAACGACTCTGTTCATATGTATATGGATCTGTTCCTTCTTTTGTTTTTTCTACTGCAACTTCTGCAAATCCTCGGGAGCATTCTATGGAACTTGCAAATTTATCTACGCTGGAGCTATTTCAGAATGATGGAAGTCCATCTACAAGGAAACTTTTTGTCCTTTGGAACCCTGCTGTGCGTCCAAAATCTTTCATTAAAAAAGCTCAGTTTGCTATGGGAACTGATGAGTTGGCTGATGAAAGTGCTAATTTTGTTCGTTCAAGCCCAATTGTGGATGCTTCACGTATTTTTGCAGAAATGGTTCAGCACGGTCTTCGCTGTATTGCATTTTGTAGATCACGGAAACTTTGTGAGCTTGTTTTATCCTACACCCGTGAGATTCTTCATGAGACAGCCCCGCATCTGGTTGATTCCATATGTGCATATCGTGGTGGCTACATTGCAGAGGAAAGAAGAAAGATAGAGAGTTCATTTTTTGGTGGTGAAATATGTGGTGTTGCGGCAACCAATGCTCTTGAGTTGGGCATTGATGTTGGAGAAATTGATGCCACTCTGCATCTAGGATTTCCTGGTAGCATTGCAAGCTTATGGCAACAAGCTGGTAGAGGTGGGAGGAGAGATAAACCATCGCTTGCTGTCTATGTTGCATTTGGGGGGCCTCTTGATCAATACTTCATGAGACATCCCAATAAACTTTTTGGAAGACCAATTGAATGTTGTCATGTTGATTCTCAAAACAAAAAGATTCTTGAGCAACATTTGGTCTGTGCTGCTCATGAACACCCTCTAAGTGTGAACTACGATGAACACTATTTTGGTCCTTGCTTGGAGAGTGTTATAATTTCTCTAAAAGCTGCAGGGTACTTGAGTTCTATTCTATCATCTGATTCTTCTAGAATATGGAACTACATTGGTCCTGAGAAATTACCCTCACATGCAGTCAATATCCGAGCAATAGAAACTGTTAGATACAGTGTCATAGATCAGAAAAAATATCAAGTCCTTGAAGAGATAGAGGAAAGCAAGGCATTCTTTCAGGTATATGAAGGTGCTGTGTACATGTGCCAGGGGAAAACCTATTTGGTTGAAAAATTAGATCTGTCTAATAAAACTGCTTTCTGCAAAGAGGCTGATCTAAAGTATTATACAAAGACTCGAGATTACACTGATATTCATGTCATTGGGGGTAATGTTGCCTATCCGCTCAAAGTAGAAACGAACAAGTTTCCAAAATCAAATGCCCGGGCTGATATATGCAAAGTAACAACGACTTGGTTTGGCTTTTATCGTATTTGGAGAGGAAGCAATCAAATCTTTGATGCTGTTGACCTCGCACTTCCTCATTACTCATACGAGTCACAGGCAGTTTGGGTTCCTGTGCCACTGTCTATAAAAGAAGCAGTAGTCAAGCAAGCTTATGATTTCCGTGGAGGTCTGCATGCTGCTTCACATGCAATTTTGCACGTAGTGCCTTTACACATCACTTGCAACTTGTCTGACTTGGCTCCTGAATGCCCAAACCCTCATGATGCCCGATTTTATCCCGAAAGAATTCTAATATATGATCAACATCCCGGAGGATGTGGAATTTCAGTGCGGGTTCAACCCTATTTTACAAAGTTCCTGGAAGCCGCACTAGAGCTTCTCACATGTTGCTGCTGCTCAGCGGAAGTGGGTTGCCCTAATTGTGTTCAGAGCTTTGTTTGCCATGAATACAACGAGGTTTTGCACAAGGATGCAGCCATCATGATCATAAAGGGTATTCTGGATGCGGGAAACTAG 3663 0.4242 MSESNHTEIQIRALTGESVTLLVTPTTTLHHLKLLLRHSFPPATTSPNFHLFFKGEKLRLQTQIASYPIQRDEFLVLIPFTKKEKEPSRTSEFLLPNVPHTTNASSSTSELADSTWSSIKEDLSLLRDATESNASNSESGNEKPLETSTERGLSREKQMELPYHLILNTLRDGSEGGPLGEHNCEVFAKVLESVNCLSELPLGHCKLLKRARSKEGGGGGGGLRKRVSDGVICLCPPWLKIVVKAFAFVNIFSAFIYLQLRDLTSSLLEEALSELAKFGVKLGLGDIKNLSLLCPHMVCFRDDVEKTSFGDNIVVLNHSTDNKDIVEENPKRVRKWLYISKTVSTLKRRDSSFRKFLGRAFEQLPYEFGDEMTVGISLEELLVAVKDNDFVKKEDKPKRVKRNKTTSKSDLNHIGCHDTKSLTAVEMIDHLKKGIGSEGQIVHIEDICARKAIYSEIPIDLSEKMRSALKCIGVSKFYCHQAESIQASLHGENVVVATMTSSGKSLCYNLPVLEVLSTNSSSCALYIFPTKALAQDQLRALLHMTKGFDNDFNIGIYDGDTSQSERMWLRDNSRLLITNPDMLHISILPHHQQFSRILSNLRFVVIDETHTYKGAFGSHTALILRRLERLCSYVYGSVPSFVFSTATSANPREHSMELANLSTLELFQNDGSPSTRKLFVLWNPAVRPKSFIKKAQFAMGTDELADESANFVRSSPIVDASRIFAEMVQHGLRCIAFCRSRKLCELVLSYTREILHETAPHLVDSICAYRGGYIAEERRKIESSFFGGEICGVAATNALELGIDVGEIDATLHLGFPGSIASLWQQAGRGGRRDKPSLAVYVAFGGPLDQYFMRHPNKLFGRPIECCHVDSQNKKILEQHLVCAAHEHPLSVNYDEHYFGPCLESVIISLKAAGYLSSILSSDSSRIWNYIGPEKLPSHAVNIRAIETVRYSVIDQKKYQVLEEIEESKAFFQVYEGAVYMCQGKTYLVEKLDLSNKTAFCKEADLKYYTKTRDYTDIHVIGGNVAYPLKVETNKFPKSNARADICKVTTTWFGFYRIWRGSNQIFDAVDLALPHYSYESQAVWVPVPLSIKEAVVKQAYDFRGGLHAASHAILHVVPLHITCNLSDLAPECPNPHDARFYPERILIYDQHPGGCGISVRVQPYFTKFLEAALELLTCCCCSAEVGCPNCVQSFVCHEYNEVLHKDAAIMIIKGILDAGN* 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1608 1220 MobiDBLite consensus disorder prediction 129 143 - -
Vra2g1608 1220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 524 853 IPR027417 -
Vra2g1608 1220 SUPERFAMILY Ubiquitin-like 2 78 IPR029071 -
Vra2g1608 1220 PANTHER ATP-DEPENDENT HELICASE HRQ1 23 1218 - -
Vra2g1608 1220 MobiDBLite consensus disorder prediction 129 156 - -
Vra2g1608 1220 SMART helicmild6 753 834 IPR001650 -
Vra2g1608 1220 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 726 877 IPR001650 -
Vra2g1608 1220 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 485 666 IPR014001 -
Vra2g1608 1220 SMART ultradead3 473 679 IPR014001 -
Vra2g1608 1220 ProSiteProfiles Ubiquitin domain profile. 7 78 IPR000626 GO:0005515
Vra2g1608 1220 Gene3D - 713 881 IPR027417 -
Vra2g1608 1220 Pfam MrfA Zn-binding domain 1109 1191 IPR018973 -
Vra2g1608 1220 Gene3D - 450 668 IPR027417 -
Vra2g1608 1220 MobiDBLite consensus disorder prediction 94 113 - -
Vra2g1608 1220 CDD SF2_C_Hrq 679 843 - -
Vra2g1608 1220 MobiDBLite consensus disorder prediction 88 113 - -
Vra2g1608 1220 CDD DEXHc_Hrq1-like 477 658 - -
Vra2g1608 1220 Pfam DEAD/DEAH box helicase 480 648 IPR011545 GO:0003676|GO:0005524
Vra2g1608 1220 Pfam Helicase conserved C-terminal domain 727 832 IPR001650 -
Vra2g1608 1220 Gene3D - 8 94 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1608 - - gmx:100819522 2063.11