Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1592 ATGCATATGTTTTCTTTCAGAGAGAAACCTGTTCCGTCCAGGGGAAAACCTTTTCCTTTCTCCTTTGTTTCGATGGAGAGGTGTTACAACGAACAAGCATACACGTCCAAGAAAATAGACCTCACTCTGAAGCTTTCTCCTTGCAGTGAGAATGCAGAAGAAAGAAAGTTGACAAGGTCATCATCAGTAGAGGGTGAGGCAAGTGGGGTCCAGTGGGGCCCTTATCTTGGCAGATCTTGTTCACTGCCAGCAGAGAAGCAGAGGAGCGTGACCTTACACTCACCTCAAGTGTTTGCCTGGGTGGCTGCTTCTGCTGTCAATGTCAATACACCATCATCACTTCCCCAACTCAAGGCACACCCAATTCTTTCTCAGGCTTCAGAGCTTCAGGGTCTGAGAGATTCAGCCAAAGGAGTTGCTTTGAAAATCCAAACTTCAACCCAGCAAGACAACAATTCCATGGCTTCTAAGAAGACAAGGACCAAGAAAATTTCAGCTAGGCATGGTGAAACTAAGCTGGAGAATCAGGCGAAGAGACATAAAGTTGGGAACTACTGCAGTCTTAAAGGTGATGTAATGGAGATCCTGAGAGGGATGCCAAGTGTGAGTGCAACTGGAGATGGCCCTGATGGGAAGAGAATAGAAGGGTTTCTGTACAAGTACAGAAGTGGTCACGTGTGTATTGTTTGTGTCTGCCATGGTAGTTTTCTCACTCCAGCTGAGTTTGTGAAGCATGCTGGGGGCAAGGAAGTGGCCAATCCCATGAAGCATATCACTGTTTTTTCTAACTCATTTTAG 798 0.4612 MHMFSFREKPVPSRGKPFPFSFVSMERCYNEQAYTSKKIDLTLKLSPCSENAEERKLTRSSSVEGEASGVQWGPYLGRSCSLPAEKQRSVTLHSPQVFAWVAASAVNVNTPSSLPQLKAHPILSQASELQGLRDSAKGVALKIQTSTQQDNNSMASKKTRTKKISARHGETKLENQAKRHKVGNYCSLKGDVMEILRGMPSVSATGDGPDGKRIEGFLYKYRSGHVCIVCVCHGSFLTPAEFVKHAGGKEVANPMKHITVFSNSF* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1592 265 PANTHER NINJA-FAMILY PROTEIN AFP1 93 263 - -
Vra2g1592 265 PANTHER NINJA-FAMILY PROTEIN AFP1 25 89 - -
Vra2g1592 265 Pfam Tify domain binding domain 228 260 IPR032308 -
Vra2g1592 265 PANTHER AFP HOMOLOG 2 25 89 IPR031307 GO:0007165
Vra2g1592 265 PANTHER AFP HOMOLOG 2 93 263 IPR031307 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1592 Vra-Chr2 23874009 23876640 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1592 - - pvu:PHAVU_009G202000g 374.015