Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1585 ATGCCCGTGTCGACTCGGTCCCAGAGGCCGAACGAGTCAAACTCGGAGCATCCGCACGATGCCTTAAAGGGGAAGATGAAAGCGCTTCTGGCATTATACGAGGAACACAAGAAGAAGAGTGTTGCTGCAGCTCCCAAGAACCCTTCTTTCGGGTCCTCAAGGGAGAAAAACGGGAGGCGCATTCTGGTGTTCGTGAGGGTGAGGCCCTTGGCGAAGAAGGAAACGGAAGCGGGTGCGCGGTGCTGCGTCAGAATCGTGGATCGCCGTGACGTTTACCTAACGGAGTTCGCCGCTGAGAAGGATTACCTTAGGTTGAAGAGGCTCAGGGGTCGCCACTTCACCTTCGACGCATCGTTTCCGGATTCTGCCTCTCAGCAGGAAGTTTATTCCGCCACAACTTCAGAACTTGTGGAAGCAGTTCTGCAAGGGAGGAATGGGTCAGTTTTCTGTTATGGTGCCACCGGAGCCGGAAAGACTTATACAATGCTTGGTACAGTGGAGAGCCCTGGTGTGATGGTGTTGGCAATTAAAGATCTGTTTAGTAAAATCAGAATTAGAAGTTGTGATGGAAACCATGCGGTTCATTTGTCCTATCTAGAGGTTTATAATGAAACTGTCAGGGATCTGCTTTCACCTGGAAGACATCTGGTTCTAAGAGAAGATAAACAGGGAATTGTCGCAGCAGGTCTTACAAAATACCGAGCTTATTCCACTGATGAAGTCATGGCGTTGCTTCAACAAGGAAATCGGAACAGAACCACAGAACCAACTCGTGCAAACGAAACATCTTCACGCTCCCATGCTATTTTGCAGGTTTTGGTTGAGTACCGAGTTAGAGATGCTGCAATGAATATTATTAACAAAATGGGCAAGCTCTCACTGATTGATCTTGCAGGGTCAGAGAGAGCTCTTGCCACAGATCAACGATCAATTAGATCTCTTGAGGGTGCCAACATAAACAGGTCTCTTCTGGCACTAAGTAGTTGCATTAATGCTCTCGTTGAAGGCAAGAAACACATACCATACCGAAATTCAAAACTCACTCAACTTCTCAAGGATTCATTAGGAGGATCTTGCAACACTGTCATGATTGCAAACATTAGCCCAAGTAATCTCTCATTTGGAGAAAACCAGAACACTCTTCATTGGGCTGACAGAGCCAAGGAGATTCGAACAAAGGGATATAGTGCAAATGAAGATGCATTGCCAGTGCCCCAGACAGAAACAGACCAGGTCAAGCTAGTACTTGACCTGCAAAAGGAGAATCGTGAATTGCGAATGCAGCTAGCGAAACAGCACCAGAAACTTGTGACACTCCAAGCACGGTCATTAGCTCCCCCAACACCACCTTCAGCGACATCACTTCTTTCCACTCCTCCAACTTCTGCCCCGCCAAATGAAAAACGAAGGACCAGACCCTCTTTCTTAGCTGCAACTCATTTCACTCCAGAGACTAAGAACAAGGGAGAGGACGTAGCTGTCAGAATCAGAACACTTCAACAAAGAGTAAAGACCTTAGAAGCAGAGCTAGATAGAGTGAAAAAGGATCACAGCTTGCAGCTGAAGCAGAAAGATGATGTCATTCGGGAGCTTTCGAAAAAGGGTGGGAAAAAAGTGGCAGCAGCAGGAGCTATTCTACTAAAGGAGACCAACACTGAAGAAGTGAAGAGTCCAAGCCATCGTTTTCGGTCCCCAGTTCCAACGGCAAAGAAACGAAGCTTTTGGGACATAACCACTGCGAACAGCCCATCAGTTACCACATTGAATGGGAGAAAAACTAGAAGTTATGTCATTTCTGAGCTTACTGCACATCCATCTAAGCTTATTCAGCCCGGGTTTGCTCGAAAAAAGGGTGATGTTTAA 1863 0.4686 MPVSTRSQRPNESNSEHPHDALKGKMKALLALYEEHKKKSVAAAPKNPSFGSSREKNGRRILVFVRVRPLAKKETEAGARCCVRIVDRRDVYLTEFAAEKDYLRLKRLRGRHFTFDASFPDSASQQEVYSATTSELVEAVLQGRNGSVFCYGATGAGKTYTMLGTVESPGVMVLAIKDLFSKIRIRSCDGNHAVHLSYLEVYNETVRDLLSPGRHLVLREDKQGIVAAGLTKYRAYSTDEVMALLQQGNRNRTTEPTRANETSSRSHAILQVLVEYRVRDAAMNIINKMGKLSLIDLAGSERALATDQRSIRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGSCNTVMIANISPSNLSFGENQNTLHWADRAKEIRTKGYSANEDALPVPQTETDQVKLVLDLQKENRELRMQLAKQHQKLVTLQARSLAPPTPPSATSLLSTPPTSAPPNEKRRTRPSFLAATHFTPETKNKGEDVAVRIRTLQQRVKTLEAELDRVKKDHSLQLKQKDDVIRELSKKGGKKVAAAGAILLKETNTEEVKSPSHRFRSPVPTAKKRSFWDITTANSPSVTTLNGRKTRSYVISELTAHPSKLIQPGFARKKGDV* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1585 620 ProSiteProfiles Kinesin motor domain profile. 60 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra2g1585 620 PANTHER KINESIN-RELATED 48 613 IPR027640 GO:0003777|GO:0007018
Vra2g1585 620 Gene3D Kinesin motor domain 51 395 IPR036961 -
Vra2g1585 620 Coils Coil 496 523 - -
Vra2g1585 620 PRINTS Kinesin heavy chain signature 143 164 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra2g1585 620 PRINTS Kinesin heavy chain signature 257 274 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra2g1585 620 PRINTS Kinesin heavy chain signature 291 309 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra2g1585 620 PRINTS Kinesin heavy chain signature 340 361 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra2g1585 620 SMART kinesin_4 58 398 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra2g1585 620 ProSitePatterns Kinesin motor domain signature. 290 301 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vra2g1585 620 Coils Coil 19 39 - -
Vra2g1585 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 435 IPR027417 -
Vra2g1585 620 MobiDBLite consensus disorder prediction 443 468 - -
Vra2g1585 620 MobiDBLite consensus disorder prediction 1 21 - -
Vra2g1585 620 MobiDBLite consensus disorder prediction 443 471 - -
Vra2g1585 620 Pfam Kinesin motor domain 66 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra2g1585 620 Coils Coil 415 442 - -
Vra2g1585 620 PANTHER KINESIN-LIKE PROTEIN 48 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1585 Vra-Chr2 23792291 23796987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1585 45 440 Miscellaneous Gene Families AT4G39050 35.523 9.37e-56 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1585 K10401 - gmx:100815524 989.949