Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1583 ATGGTGAAACGTGAGACAGTGATGGAGCATGATGAGCCTAATGCAGATATATTCCCTGCAGATGATGCGTATGCTATGTTCTTGGGGGTGGGAACACCAGTGCAAATTGTGTTCCTTATGATTGACACAGGGAGCCCCATCACGTGGTTCCAGTGCGGCCCCTGCACCCACTGCTACCCCATGCGCCGCCCTCTCTTCAACCCACCTGCATCAACCTCCTTCAGACAACTTGGCTGCTACGACGACACGTGTCTCATTCCAATGATGAGGAGTATTTTTGGAAACTGCAAAGGATGGAATTGTAGATACAATGTAGAATATGACATGAAATCTCAATCTCGTTCCTTTGGTGTCATGGTCACTGACACCCTTAACTTTGAGCACTCTAATGTTGAAGTCAAGGACTTCGTAATGGGGTGTGGGAACTCTTATGAGGGTCCCTTTAGGACTCAGTTTTCGGGAGTTTTAGGTCTCGGACGAGGTCCACTTTCAATCCAAAATCAGCTTCATTCGAAGGCCTTTTCCTTTTGCATAGTGAGTCTTGGATCGGAGAAACCTTCCTCTCTTGTGTTTTATGAGACATTACCCAAACAACGTGGTAATACTAACACATCCATTATGGTTCCCTTGAGAGAGAACAGTAGATACCCTTTCTATTACTTTGTGCAGTTTGTGGGAATAAGCATTAACGGATTCATGTTAGATATTCCATCTAGTGTTTGGGGTTATGGCTTGAACTACGATGGTGGGGTTATTATAGACGCGGGAAAAGTGCTAACCTATTTGCCTAGTGAAGCGTACAATATATTCAGGTCAGAGATACTGAGAACAGATGGTAATTTTACAAAGAAACGATACAAGGAGTTAGAGTTTTGTTACGTAGAAAGTCCTACCAATGTTTATCCAACAGTTGAATTTTTCTTTGAAAATGGTAACATTGCGGGTGAAAATTTCGTGTCCTTCAAATTGAACAACCGTCAATTACTCATCACACCACATGAGGGAATAGTTTGTCTATCGTTTGCAGAAGCAAAAAATTCTGCACTTACTGTTATTGGCACCAACCATCTCCAAGGAACTCTGTTAACGTATAATTTGGTTGATGATATTATTATCTTCACATGTAATAAATGTTAG 1137 0.4204 MVKRETVMEHDEPNADIFPADDAYAMFLGVGTPVQIVFLMIDTGSPITWFQCGPCTHCYPMRRPLFNPPASTSFRQLGCYDDTCLIPMMRSIFGNCKGWNCRYNVEYDMKSQSRSFGVMVTDTLNFEHSNVEVKDFVMGCGNSYEGPFRTQFSGVLGLGRGPLSIQNQLHSKAFSFCIVSLGSEKPSSLVFYETLPKQRGNTNTSIMVPLRENSRYPFYYFVQFVGISINGFMLDIPSSVWGYGLNYDGGVIIDAGKVLTYLPSEAYNIFRSEILRTDGNFTKKRYKELEFCYVESPTNVYPTVEFFFENGNIAGENFVSFKLNNRQLLITPHEGIVCLSFAEAKNSALTVIGTNHLQGTLLTYNLVDDIIIFTCNKC* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1583 378 Gene3D Acid Proteases 200 378 IPR021109 -
Vra2g1583 378 Pfam Xylanase inhibitor C-terminal 220 374 IPR032799 -
Vra2g1583 378 Pfam Xylanase inhibitor N-terminal 24 191 IPR032861 -
Vra2g1583 378 ProSiteProfiles Peptidase family A1 domain profile. 24 374 IPR033121 -
Vra2g1583 378 Gene3D Acid Proteases 9 191 IPR021109 -
Vra2g1583 378 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 21 367 - -
Vra2g1583 378 SUPERFAMILY Acid proteases 21 378 IPR021109 -
Vra2g1583 378 PANTHER OS07G0603500 PROTEIN-RELATED 21 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1583 Vra-Chr2 23780615 23781751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1583 24 378 Miscellaneous Gene Families AT1G77480 24.011 1.87e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1583 - K22683 vra:106753617 789.645