Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1573 ATGGTTGCAACAGCCGTAACAGCGTCGTTTATCCCTGTTGTGCCTTCGCCGGACTCTGGAAAAGGGAAGCAGACGCAGTTGGGTGGTGGGTCTGCGAGCCTGAGTGGACTCCAACCGAGAAATGGTTTATGCGGTGGCTTGCAGGTCAAGGCAAACGCTCATGCCCCTCCGAAGGTTAACGACACCGTGAAGGTTGAGGATGATTTGCCATCTTCATCGTCACTTACTCATGCTCCGAGGACTTTCATCAACCAGTTACCGGACTGGAGCATGCTTCTCGCTGCCATCACCACCGCCTTCCTAGCTGCGGAGAAGCAGTGGATGATGCTCGATTGGAAGCCGCGTCGCCCCGACATGCTCGTTGACCCCTTTGGGATAGGAAAGATTGTGGAGGACGGGCTTGTGTTCAGGCAGAACTTCTCAATTCGGTCCTACGAAATTGGCGCTGACAAAACCGCGTCTATAGAGACGATGATGAATCATTTGCAGGAGACAGCTCTTAATCATGTTAAGACTGCGGGGCTTCTTGGTGATGGTTTTGGCTCCACGCCTGAAATGTGTAAGAAGAACTTGATTTGGGTGGTTACCAAGATGCAGGTTGTGGTTGATCGGTATCCTAAATGGGGTGATGTTGTTCAAGTCGATACTTGGGTTTCCGCATCAGGAAAGAATGGTATGCGTCGTGATTGGCTTGTGCGTGATGCCCAAACGGGTGAAATCTTGACAAGAGCCTCCAGTGTTTGGGTCATGATGAATAAAGTGACAAGGAAACTGTCTAAAATTCCCGAAGAAGTCAGGGGAGAGATAGGCACTTATTTTGTGGATTCTGCTCCAGTTGTCGAAGAGGATAAAAGAAAATTATCCAAACTTGATGATTCAGCTAATTTCATTCGCACTGGTTTAAGTCCTAGATGGAGTGATCTAGATGTTAACCAGCATGTTAACAATGTGAAGTACATTGGGTGGATTCTGGAGAGTGCTCCACAACCACTTTTGGAGAGTCATGAGTTGTGTGCCATGACTTTGGAGTACAGGAGGGAGTGTGGCAGGAACAGTGTGCTGGATTCCCTGACTGATATATCTGGTGCTAATGTAGGCAGTTTAGCCGACGGTGGACTTTTTGAGTGCAGACACTTGCTTCGACTTGAAGATGGTGCTGAAATTGTGAGGGGTAGGACCGAATGGAGATCCAAGTCTGCAAACAACTTTGGAGTTCTGAGTCAGGTTTCAGCAGAAAGCACCTAA 1245 0.4851 MVATAVTASFIPVVPSPDSGKGKQTQLGGGSASLSGLQPRNGLCGGLQVKANAHAPPKVNDTVKVEDDLPSSSSLTHAPRTFINQLPDWSMLLAAITTAFLAAEKQWMMLDWKPRRPDMLVDPFGIGKIVEDGLVFRQNFSIRSYEIGADKTASIETMMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTKMQVVVDRYPKWGDVVQVDTWVSASGKNGMRRDWLVRDAQTGEILTRASSVWVMMNKVTRKLSKIPEEVRGEIGTYFVDSAPVVEEDKRKLSKLDDSANFIRTGLSPRWSDLDVNQHVNNVKYIGWILESAPQPLLESHELCAMTLEYRRECGRNSVLDSLTDISGANVGSLADGGLFECRHLLRLEDGAEIVRGRTEWRSKSANNFGVLSQVSAEST* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1573 414 Pfam Acyl-ACP thioesterase 133 396 IPR002864 GO:0006633|GO:0016790
Vra2g1573 414 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 294 395 IPR029069 -
Vra2g1573 414 Pfam Acyl-ATP thioesterase 1 122 IPR021113 GO:0016790
Vra2g1573 414 MobiDBLite consensus disorder prediction 19 33 - -
Vra2g1573 414 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 1 402 - -
Vra2g1573 414 CDD 4HBT 136 252 - -
Vra2g1573 414 MobiDBLite consensus disorder prediction 14 33 - -
Vra2g1573 414 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 1 402 IPR045023 GO:0006633|GO:0016297
Vra2g1573 414 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 130 282 IPR029069 -
Vra2g1573 414 Gene3D Hotdog Thioesterase 126 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1573 Vra-Chr2 23635647 23639823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1573 1 399 Acyl Lipid Metabolism Gene Families AT1G08510 71.220 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1573 K10781 - gmx:100781381 699.508