Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1572 ATGTTAAAGCAAATTCTTAGCAAATTGCCCAAGAAGGTGCCAAAATCTGACACATCAGATTCGGCTCAGGGTGATTCTGGGAGTGCTACTACTTTTGCAAATGTCTTTCAGTGTTCGAATGTTGGGGTTGCAATTTCAAGCAAATTAAATGCAGTGAAGCGGGTATCATCAGTGGTATTTCCAGCAAGCTTGAGTGCTGGAGTGGAAGCAGTTGATCCCCATATATCTTTCAAAGATGTTTCAAATATACAGAAGCAAAACCTGTTTATCAGTAAGTTGAATCTTTGCTGCACTGTTTATGATAAGAATTGCACAGAGAAAGATGTTAAACATCAAACATTAGTAGAGCTTGTTGATTTTGTTTCTTCTGGATCTGCAAAGTTCACAGAACCATCAATAGCTGCAATGTGTAAAATGTGTGCAAGTAATTTGTTCAGGGTTTTCCCACCCAAGTTTCGTCCTAGTGCTACTGGTGGAGAAACAGAAGATGAAGAGCTTATGTTTGATCCTTCCTGGTCTCACCTGAAAATTGTTTATGATCTTCTCCTTCAATTCATAAATTATAACGCGCTTGATCTAAAGGTGGCAAAATTGCATATTGATAATGCGTTCATTGTTAGATTGCTTGACCTTTTTGATTCTGAGGACCCTAGAGAAAGAGATTGCCTGAAAACAATTCTGCATAGAATCTATGGGAAATTCATGGTACATAGGCCTTTCATACGGAAATGTGTCAGCAATATCATCTACCGATTTGTTTTTGAGACTGAACGTCATAATGGAATTGCTGAGTTGCTGGAGATTTTTGGGAGTGTAATTTGTGGGTTTGCGTTGCCACTGAAGGAGGAGCACACAATATTTTTGTGTAGGGTTTTAATGCCCTTACACAAACCTAAATCTGTCGGTAGTTACCATCAGCAATTAACATATTGTGTTTTACAGTTCATTGATAAGGATCCAACACTGGCTAGCACGGTGATAACGGGGCTATTGAAGTACTGGCCAGTAACAAATAGCCAAAAGGAGCTAATGTTCATAAGTGAGTTGGAAGAGGTTTTGGATGCCACAATCATGACTGAATTTCAGAAGGTTATGGTCCCACTGTTCCGACGAATAGCTTGCTGTCTCAATAGCTATCATTACCAGGTGGCTGAACGAGCTCATTTGCTATGGAACAACGAACACATCTTCGATGTTGTCTCTCAAAACCGGGAGGTGATTCTGCCTCTTGTGTTCACAGCACTTGTACATAACACCCAAAATCACTGGAACCGAGCAGTGCTCAACCAGACCGAGAACATGAGAAAGATGCTGTCTCAGATGGACGAGGAACTGGTGCTTGCCTGCCAACTCAAGTTGGAGGAGGAAGATTCAAGGTCAAGTGCCGCAGCTGAGCAGCGAAGAGTGACATGGGAACGTCTTGAAGCTGCTGCCACTGCCAATATCCAACCTATAGCTGTAGCAGGTGATGTTGTAGCATCTCCTGCATGTTCGGTGGCATGCTAG 1506 0.419 MLKQILSKLPKKVPKSDTSDSAQGDSGSATTFANVFQCSNVGVAISSKLNAVKRVSSVVFPASLSAGVEAVDPHISFKDVSNIQKQNLFISKLNLCCTVYDKNCTEKDVKHQTLVELVDFVSSGSAKFTEPSIAAMCKMCASNLFRVFPPKFRPSATGGETEDEELMFDPSWSHLKIVYDLLLQFINYNALDLKVAKLHIDNAFIVRLLDLFDSEDPRERDCLKTILHRIYGKFMVHRPFIRKCVSNIIYRFVFETERHNGIAELLEIFGSVICGFALPLKEEHTIFLCRVLMPLHKPKSVGSYHQQLTYCVLQFIDKDPTLASTVITGLLKYWPVTNSQKELMFISELEEVLDATIMTEFQKVMVPLFRRIACCLNSYHYQVAERAHLLWNNEHIFDVVSQNREVILPLVFTALVHNTQNHWNRAVLNQTENMRKMLSQMDEELVLACQLKLEEEDSRSSAAAEQRRVTWERLEAAATANIQPIAVAGDVVASPACSVAC* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1572 501 MobiDBLite consensus disorder prediction 1 25 - -
Vra2g1572 501 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 478 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vra2g1572 501 PIRSF PP2A_B56 4 491 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vra2g1572 501 Gene3D - 82 477 IPR011989 -
Vra2g1572 501 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 499 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vra2g1572 501 SUPERFAMILY ARM repeat 86 459 IPR016024 -
Vra2g1572 501 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1572 Vra-Chr2 23630650 23634456 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1572 K11584 - gmx:100814349 801.971