Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1556 ATGCTTCACTCCTCCACTTCTCTTCTTCCCCAAAATAAGCGTTTTGTGTTCTCCTTCCGCTCCAAACCTTCTCATTCTCATTCCTTTTCCCATTCTCTCTCTTTCTCCAAATTTATCTCTCTTCCTTCTTCTCTTTCTACATGTTGTCCAGTCGCTCGAATTTCCACCGAGACCTTGGAGGTCTCGCCGCCTCCGCGGGGCGACTTCAACTTCTACCGCGAAATCGCACGCCTCGCCGCGCTCCGCGACAGGATTGCGGCGTGCGCCACGCTCGTCGAGAAGCTCCGAGTGCTCAACGCCGATTCCAGAGTGAAGCGCTTCTTCAGTTCGGGTCGCGGCCTTGCTAGGGTTTTGGCCTCGCTCCGGTTGAGCTCCGACCAACTATTCCTGCTCAAATGCGTGGTTGCTGCCGGGCAGGAGCATGTGCTGTGTTTGGACGGAACCGAATCGCTAGAATCCGCCGCGGCTGCTGCTGCTACCGCGAGCGCCGTGAAGAGCGCGCTCTACGCTATTGCGGAGATGATTGAGAATTTGAATTCCTTTGATGGCAATGGTGGTGTGGGTTCGGGGATGGCGTTGGGGGATTACGAGATTATTGAATTGAACAAGTTGTTAGAAACTTTGGCGGAAATTGAGCAATTCTATGACTGTATTGGAGGAATTATTGGATATCAGATAACAGTTCTGGAACTTATTGTCCAGAAGTCATTTGAGAGGCAGAGTATGAAGTGGTCACACCAGATGCATGAAGCGAAAGAATGCCAAATTTTAGGAATTAATGCACCTAATGGGCATAACCTTTCTGAAGACACAGAGTATGCTTCTCAAGCAGCTCTATGGGGTATAGAGGGTTTGCCAGACCTAGGTGAAATTTACCCTTTGGGAGGTTCTGCCGACAGGCTTGGTTTGGTTGATCCTAAGTCAGGTGAATGCCTGCCTGCTGCAATGCTACCATATTGTGGAAGGACTTTGTTGGAAGGTCTTATAAGAGATCTTCAGGCTAGAGAATTCTTGTACTTCAAGTTATACAATAAACAATGTATCACACCCGTTGCAATAATGACAAGTGCCGCAAAGAACAACCACAAACACGTCACTTCTCTGTGTGAAAGACTTTCATGGTTTGGGAGAGGTCGATCAACTTTCCAACTTTTTGAGCAGCCTCTTGTTCCAGTTGTTGGTGCAGAAGAAGGTCAGTGGCTGGTCACCAAACCATTGAGTCCCCTGAGCAAGCCTGGTGGTCATGGTGTCATATGGAAACTTGCACATGACAAAGGCATCTTCAAATGGTTTTATTCTCGAGGAAGAAAAGGTGCAACTCTGCGCCAAGTCAGTAACGTTGCGGCAGCTACAGATTTAACCCTCCTAGCCTTAGCAGGGATTGGCTTACGTCATGGAAAGAAACTGGGATTTGCATCTTGTGAGCGGATATCAGGCGCTACAGAAGGAGTTAATGTGCTGATGGAGAAGAAAAGTATTGATGGTAAATGCGAATATGGAATTTCTTGTATTGAGTACACTGAGTTTGACAAGTTTGGAATTACTGCTGGACCTCTTGCTCCAAAAAGTTTGCAGGCGGAGTTCCCAGCCAATACAAACATCTTATATGTTGATTTACCTTCCGCGGAGCTAATTGGATCAAGTAAGAGTAGAAATAGTTTGCCTGGAATGGTGCTAAATACCAAAAAGCCAATAGTTTACTCAGATCAGTTTGGTAGATGTCATAGCGTCTCTGGTGGTAGACTTGAGTGCACAATGCAAAATATTGCTGACAATTATTTCAATTCGTACTCTTCTAGATGTTATAATGATGTTGAAGATGAGCTAGATACTTTTATTGTATATAATGAAAGAAGGAGAGTTACCTCCTCTGCCAAGAAAAAAAGAAGGCATGGAGACAAGTCTTTACACCAGACACCGGATGGTGCTCTTTTGGATATCTTACGAAATGCTCACGATCTTCTTTCACAGTGTAATATAAGACTTCCTGAGATTGAAGCTAATGAGAACTATGTTGATTCGGGACCACCATTTCTCATCCTTTTGCATCCTGCTCTTGGTCCTCTTTGGGAAGTCACTAAGCAAAAGTTTTATGGTGGTTCCGTATCGGAGGGCTCTGAGTTACAAATAGAGGTTGCAGAGTTTTTTTGGAGGAATGTACAGCTCAATGGAAGCCTGATCATAATAGCTGAGAATGTTATGGGCTCAATGAAGATTAATGAGAGCGGTGAATCCATACTACATTATGGCCAAAGGTGTGGAAAATGTAAGTTGCAAAATGTCAAGGTGTTGAACAAGGGAATTGATTGGAACTGTGATCGAAACATATACTGGAAACATGATGTGCAGCGATCTGAGGTGCTGCAAATCATACTTCATGGAAATGCTGAATTTGAGGCTACTGATGTTGTCTTACAGGGAAATCACGTGTTCGAAGTTCCAGATGGCCACAGACTCAAAATCATGCCGGGAAACCCAGGTTTAGCAATCCAGTTAGATCCAATTGATAAAGATATGATGGAGAGGGGAAGCTGGCACTGGAATTACAGGGTAGAAGGTTCTCACATTCAGCTAGATTTAGTAGAATCATAA 2592 0.4483 MLHSSTSLLPQNKRFVFSFRSKPSHSHSFSHSLSFSKFISLPSSLSTCCPVARISTETLEVSPPPRGDFNFYREIARLAALRDRIAACATLVEKLRVLNADSRVKRFFSSGRGLARVLASLRLSSDQLFLLKCVVAAGQEHVLCLDGTESLESAAAAAATASAVKSALYAIAEMIENLNSFDGNGGVGSGMALGDYEIIELNKLLETLAEIEQFYDCIGGIIGYQITVLELIVQKSFERQSMKWSHQMHEAKECQILGINAPNGHNLSEDTEYASQAALWGIEGLPDLGEIYPLGGSADRLGLVDPKSGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYNKQCITPVAIMTSAAKNNHKHVTSLCERLSWFGRGRSTFQLFEQPLVPVVGAEEGQWLVTKPLSPLSKPGGHGVIWKLAHDKGIFKWFYSRGRKGATLRQVSNVAAATDLTLLALAGIGLRHGKKLGFASCERISGATEGVNVLMEKKSIDGKCEYGISCIEYTEFDKFGITAGPLAPKSLQAEFPANTNILYVDLPSAELIGSSKSRNSLPGMVLNTKKPIVYSDQFGRCHSVSGGRLECTMQNIADNYFNSYSSRCYNDVEDELDTFIVYNERRRVTSSAKKKRRHGDKSLHQTPDGALLDILRNAHDLLSQCNIRLPEIEANENYVDSGPPFLILLHPALGPLWEVTKQKFYGGSVSEGSELQIEVAEFFWRNVQLNGSLIIIAENVMGSMKINESGESILHYGQRCGKCKLQNVKVLNKGIDWNCDRNIYWKHDVQRSEVLQIILHGNAEFEATDVVLQGNHVFEVPDGHRLKIMPGNPGLAIQLDPIDKDMMERGSWHWNYRVEGSHIQLDLVES* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1556 863 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 19 857 IPR039741 -
Vra2g1556 863 SUPERFAMILY Nucleotide-diphospho-sugar transferases 128 733 IPR029044 -
Vra2g1556 863 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 192 650 IPR029044 -
Vra2g1556 863 PANTHER UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 3, CHLOROPLASTIC 19 857 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1556 K22920 - gmx:100788781 1471.83