Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1554 ATGGAAAACGTGGACGAACTCTTATCTTCCTTAATCTCAGACATCCATTCATACACCGACAAAGACCCTCTTCTCCCATGGCTTCGCGCGATCCGAAAGATAAAAGACACTCTTCCTCCAAAAATCCTAAAGGAAAAACTACCGGCGTTCTTGCAGAAATGCGCTCACACCTTCGAGCTCGATCGACGTTACAGAAACGACATGCGCTATATTCGAGTGTGGCTCCATCTGATGGATTTTGTGAGTGATCCAAAAACACTTTTGAGTACCATGGAGGTTAATCGCATTGGGACAAAACGTAGTGAATTCTACCTAGCGTATGCTCTTTACTACGAAAAGTGCAAGAAGTACGATGAAGCAGAGAGAATGTACCATGTGGGAGTGAAGAACCTTGCAGAGCCTCTAGATAAATTGCAGAAATCATATGAACAATTTCTTCAACGCATGGAGCAGCGAAAAAATAATAGGAGAATCCAGCACCAGGAAGCAAAAACTGCCAGGAAGCCTCTGTCTTTAAAGAGTTCTGATGACAAGAAGACAGAGGGAAGCAAAAGCAATGGATCATGTTGCCTTGAGGGTGTGCAGAAGGGGCCCGAAATTCAGAGTTATGCAGCTAAAGCTGTAGCTAGTGATAAAAACTTAAAGACTAAGAAGGATGAGAGCAAAAAATTTCGTGGTGATGATACAGTTGTAGTAAAATTTGTTGACACTGCCATGGTTGGAAAGTCTGAAGCTGAAGATGCATGCCATCATGGATTAGTGGATCCTACAATAAATATGAAGGAGGCCATGAATGCCATCAACAGCATGTTCCGGGAGCCATTGGAGATTGTTCCATCAGGCAGGAAATCTCATAAAAACCATTCAAAAGAAAATCGTAGTACAAAGAACGAGTTTGAGGTTTTTGTTGATGAAAACTTGGATCATGGAATCAAACCATCCGCTTCTTTATCACTTCAGAAAAGGACCGAAGCCAGCCAACCTCACCAAGAACCGCTCCAGATATACATTGATGGTGAAGAGCATTCTGAGGACAGTAATACGAATTTGTCTGAAGGTGGTTCTGCTTCATCGACATCGCAATCATATGGCTTTGTTTTTCTCCGCCCCAGGGATATCACTTCCGAAAAATCTAGTGACATGGATGCTGACAGCTGTCGTAATTCAAAGTTCAGAGAGGATACAGTCGTTTGCAAATTTGTTGGTTCCACCATTTTGGATGAACCAGAGGTGGAAAATGTTTGCCACCATGGTTTAGTAGACCCCACCATCAACTTGAAGGAAGCTATGGACGATATAAATAACATGTTTGGGAAGCCAATAGATTTTGTTAGGAAAAGAAGAACCACCAAACAGGAGAAAGCACCCCAGAGCAATAGGGGAAATGACTTTGGTGGGTTTTCAATCCTTGCTGACGACGACCATCTGGAACAGCAAGTTCCACCACCACCAAAATTGCCTGGAAAGTCCAAGGAACGTGATTTGTTTGAGCCAACTCTCCTCACAAAGGAAGCCATGGACGATATAAACAAAATGTTTAACATGCCCCTGAATTTTTAG 1560 0.4276 MENVDELLSSLISDIHSYTDKDPLLPWLRAIRKIKDTLPPKILKEKLPAFLQKCAHTFELDRRYRNDMRYIRVWLHLMDFVSDPKTLLSTMEVNRIGTKRSEFYLAYALYYEKCKKYDEAERMYHVGVKNLAEPLDKLQKSYEQFLQRMEQRKNNRRIQHQEAKTARKPLSLKSSDDKKTEGSKSNGSCCLEGVQKGPEIQSYAAKAVASDKNLKTKKDESKKFRGDDTVVVKFVDTAMVGKSEAEDACHHGLVDPTINMKEAMNAINSMFREPLEIVPSGRKSHKNHSKENRSTKNEFEVFVDENLDHGIKPSASLSLQKRTEASQPHQEPLQIYIDGEEHSEDSNTNLSEGGSASSTSQSYGFVFLRPRDITSEKSSDMDADSCRNSKFREDTVVCKFVGSTILDEPEVENVCHHGLVDPTINLKEAMDDINNMFGKPIDFVRKRRTTKQEKAPQSNRGNDFGGFSILADDDHLEQQVPPPPKLPGKSKERDLFEPTLLTKEAMDDINKMFNMPLNF* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1554 519 SMART mad3_bub1_i 4 128 IPR013212 -
Vra2g1554 519 MobiDBLite consensus disorder prediction 342 361 - -
Vra2g1554 519 MobiDBLite consensus disorder prediction 152 183 - -
Vra2g1554 519 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 4 519 IPR015661 GO:0007094
Vra2g1554 519 PANTHER OS11G0128700 PROTEIN 4 519 - -
Vra2g1554 519 Pfam Mad3/BUB1 homology region 1 11 128 IPR013212 -
Vra2g1554 519 Gene3D - 9 167 - -
Vra2g1554 519 MobiDBLite consensus disorder prediction 448 468 - -
Vra2g1554 519 ProSiteProfiles BUB1 N-terminal domain profile. 11 166 IPR013212 -
Vra2g1554 519 Coils Coil 135 166 - -
Vra2g1554 519 MobiDBLite consensus disorder prediction 152 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1554 Vra-Chr2 23433084 23435604 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1554 - - gmx:100806627 875.159