Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1538 ATGGAATCATCCGCTGCCATTCGATCTTTTAACTATACCATGGGCACTATGTCCCATATGCGACCTTCCCGTGATAAACAAGTTGTAGTTCCCATCCACAATGTCCGATGGAACTCTAAAAGTAGACTTTTCATCCAGCATTTGGCATATGATCGGAAGCACATTAATTCCCACATGAAGGGTAACAACACACTAGTTTCATGTGCAAAAACAGCTGAACCTATCAACACATCCAAGTCTGGTGATGCTTCTTCAGATAGTACTCCACAAGGCTCGTTGGAGAAAAAGCCTTTGCAAGCTGCTACTTTTCCTAATGGATTTGAGGCTTTGGTATTAGAGGTGTGTGATGAGACTGAAATCGCTGAACTGAAAGTAAAGGTTGGAGATTTTGAAATGCATATTAAGCGAAACATTGGAGCAACAAAGGTTCCTTTGTCTAACATTTCACCAACAACTCCTCCGCCTATTCCATCTAAACCAATGGATGAATCAGCACCTGGTACCCTGCCACCATCACCTCCAAAATCATCTCCAGAAAAGAAAAATGCATTTATAGATTCTTTCAGAGAGAAATCACCAAGAATGGCAGCATTGGAGGCTTCTGGTACCACCACTTATGTCTTAGTGCCATCTCCCACGGTTGGCTTCTTCCGAAGAGGTAGAACAGTGAAAGGCAAGAGACAACCTCCTATCTGTAAAGAGGGTGATTTAGTCAAAGAAGGGCAAACCATCGGTTATTTGGATCAGTTTGGCACTGGACTTCCGGTTAAGACTGATGTGGCTGGACAAGTGTTGAAGCTACTTGTTGATGATGGAGAGCCTGTTGGTTACGGAGACCCCCTTATTGCTGTCTTGCCATCTTTTCATGACATCAAATGA 879 0.4323 MESSAAIRSFNYTMGTMSHMRPSRDKQVVVPIHNVRWNSKSRLFIQHLAYDRKHINSHMKGNNTLVSCAKTAEPINTSKSGDASSDSTPQGSLEKKPLQAATFPNGFEALVLEVCDETEIAELKVKVGDFEMHIKRNIGATKVPLSNISPTTPPPIPSKPMDESAPGTLPPSPPKSSPEKKNAFIDSFREKSPRMAALEASGTTTYVLVPSPTVGFFRRGRTVKGKRQPPICKEGDLVKEGQTIGYLDQFGTGLPVKTDVAGQVLKLLVDDGEPVGYGDPLIAVLPSFHDIK* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1538 292 MobiDBLite consensus disorder prediction 75 99 - -
Vra2g1538 292 SUPERFAMILY Single hybrid motif 203 283 IPR011053 -
Vra2g1538 292 MobiDBLite consensus disorder prediction 75 95 - -
Vra2g1538 292 Gene3D - 205 284 - -
Vra2g1538 292 PANTHER BIOTIN/LIPOYL ATTACHMENT DOMAIN PROTEIN 1 292 - -
Vra2g1538 292 PANTHER IS A MEMBER OF THE PF|00364 BIOTIN-REQUIRING ENZYMES FAMILY-RELATED 1 292 - -
Vra2g1538 292 MobiDBLite consensus disorder prediction 143 181 - -
Vra2g1538 292 CDD biotinyl_domain 209 284 - -
Vra2g1538 292 MobiDBLite consensus disorder prediction 148 177 - -
Vra2g1538 292 Pfam Biotin-requiring enzyme 227 282 IPR000089 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1538 Vra-Chr2 23286352 23293378 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1538 111 286 Acyl Lipid Metabolism Gene Families AT5G15530 24.294 1.28e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1538 - - gmx:100792471 469.544