Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1537 ATGAAGCCACACACTCAGGCTTCTTCTTTCGCCACTCCACTCCCGCACGTGCCTTTCTTTCGCGCCACCGCTTCCTCACGTGCCGCCCCGGCGGAATCTCTTCATGCCCCCGCCTCCGCCGATGAATTCCGTCGCATCTGGACTGCGAAACGCCGCCGCGTCAACCTGTCCGTCCGCCACTCCACATGTGTCGCCGCGGCTTCGAATCCGGGTGGCTCCGGTGGCGATTATAGTCAACCTCGGAGCAGCCGGCGCGGCGTGCTGATGGCACCCTTCCTGGCTGCCGGCGCGTCGGTTCTGTTATCGGCGTCCTCGAGGGCGGAGGAGAAGGTGGCGGAATTGGCTCCGACGGCGCCGAAGCTGGAGGAGGCGAAAAAGGAGGAGGAGGAAGTGATAACGTCGAGGATTTACGACGCGGCGGTGATAGGGGAACCGTTGGCGATAGGGAAAGAGAAAGGGAAGGTGTGGGAGAAGTTGATGAATGCGCGAGTGTTGTATTTGGGGGAAGCGGAACAGGTTCCTGTTCGAGACGATAGGGAATTGGAGCTTGAGATTGTGAAGAATTTGCATAGGCGCTGTTCGGAGAAGGAAAAAAAACTGTCTCTTGCGCTGGAAGCTTTTCCCACTAATCTTCAGGAACCGCTCAATCAGTATATTGACAAGAAGATAGATGGAGACACCTTGAAGTCTTATACATTGCATTGGCCACCTCAAAGATGGCAGGAGTATGAACCTATTCTGAGCTACTGTCGTGAAAATGGAATCCGTGTAGTCGCTTGTGGTACTCCGCTGAAGATCTTAAGAACTGTCCAAGCAGAAGGAATTCGTGGGCTTACAAAGGCTGAACGTAAACTTTATGCTCCTCCAGCTGGGTCGGGCTTTGTATCAGGCTTTACTTCTATCTCACGTAGACCTTCTGTCGATAGTACTCAAAATCTGTCCATTCCTTTTGGTCCGAGCTCATACCTCTCTGCCCAGGCCAAAGTAGTTGATGAGTATTCTATGTCCCAGGTTATCTTACAAAATGTGCTTGATGGAGGGTCCACTGGTATGTTAATTGTTGTGACTGGTGCAAGCCATGTTACGTATGGATCTAGAGGAACTGGCGTGCCAGCTAGAATTTCAGGAAAAATACAAAAGAAAAACCAAGTAGTTATATTACTTGACCCTGAAAGACAATTCATTCGCAGAGAAGGAGAAGTTCCCGTGGCTGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAGTAGAAATTGCTTTGATCGTGCTGAGATTGCTCGTGTAATGAATGCTGCTGGGCGGAGGCGAGATGCCCTACCACAGGATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCACCAGAGGTTTTGCAGAACTTCTTTGATCTAGAACAGTATCCTCTGATTTCAGAACTCACTCACCGTTTCGGGGGTTTCAGGGAAAGATTGTTGGCAGATCCCAAATTCTTGCACAGATTAGCTATAGAAGAAGCCATATCAATAACAACTACATTGTTGGCACAATATGAAAAGCGGAAAGATAATTTTTTCCAAGAGCTTGACTACGTTATTACAGACACTATCAGAGGATCAGTAGTTGATTTTTTTACCGTGTGGCTTCCTGCACCAACTTTGTCATTCCTTTCATATGCTGATGAGATGAAAGCACCTGACAACATTGGTTCTCTAATGGGACTTCTAGGTTCCATCCCGGACAATGCATTTCAAAAGAATCTTGCAGGAACAAACTGGAATCTCAATCATAGAATTGCATCAGTTGTATTTGGTGGGCTAAAACTTGCTAGTGTTGGATTTATTTCAAGCATTGGAGCTGTGGCTTCATCAAATTCTCTATATGGAATCCGTAAATTCCTTAATCCAGCCATTGTCACTGAGCAACGGGTTATAAGGTCACCAATACTGAAAACAGCTGTCATATATGCTTGCTTTCTTGGAATTTCTGCAAATCTCCGTTATCAGATAATTGCTGGGATAGTGGAGCATCGGATTTCTGAACAGTTTGCTTCCCAGACATTCTTTGTAAATATGCTTTCTTTTGTCGCACGGACTGTCAATTCCTATTGGGGAACCCAGCAATGGATTGACCTCGCCCGCTTTACTGGCCTGCAAGTTAGAAAGACAGAGTCGCCAACATCAGATTCTCCGAATAGTGCTGCAATTTTATGCAACGAAGCAGAAGAAACCACCATTGATGAGATAGAAAAATAA 2229 0.4697 MKPHTQASSFATPLPHVPFFRATASSRAAPAESLHAPASADEFRRIWTAKRRRVNLSVRHSTCVAAASNPGGSGGDYSQPRSSRRGVLMAPFLAAGASVLLSASSRAEEKVAELAPTAPKLEEAKKEEEEVITSRIYDAAVIGEPLAIGKEKGKVWEKLMNARVLYLGEAEQVPVRDDRELELEIVKNLHRRCSEKEKKLSLALEAFPTNLQEPLNQYIDKKIDGDTLKSYTLHWPPQRWQEYEPILSYCRENGIRVVACGTPLKILRTVQAEGIRGLTKAERKLYAPPAGSGFVSGFTSISRRPSVDSTQNLSIPFGPSSYLSAQAKVVDEYSMSQVILQNVLDGGSTGMLIVVTGASHVTYGSRGTGVPARISGKIQKKNQVVILLDPERQFIRREGEVPVADFLWYSAARPCSRNCFDRAEIARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQYPLISELTHRFGGFRERLLADPKFLHRLAIEEAISITTTLLAQYEKRKDNFFQELDYVITDTIRGSVVDFFTVWLPAPTLSFLSYADEMKAPDNIGSLMGLLGSIPDNAFQKNLAGTNWNLNHRIASVVFGGLKLASVGFISSIGAVASSNSLYGIRKFLNPAIVTEQRVIRSPILKTAVIYACFLGISANLRYQIIAGIVEHRISEQFASQTFFVNMLSFVARTVNSYWGTQQWIDLARFTGLQVRKTESPTSDSPNSAAILCNEAEETTIDEIEK* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1537 742 SUPERFAMILY EreA/ChaN-like 154 410 - -
Vra2g1537 742 Pfam Protein RETICULATA-related 481 665 IPR021825 -
Vra2g1537 742 Gene3D - 150 413 - -
Vra2g1537 742 Pfam Haem-binding uptake, Tiki superfamily, ChaN 155 374 IPR007314 -
Vra2g1537 742 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 1 741 - -
Vra2g1537 742 CDD ChanN-like 163 387 IPR007314 -
Vra2g1537 742 PANTHER PROTEIN RETICULATA-RELATED 5, CHLOROPLASTIC 1 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1537 Vra-Chr2 23275502 23282216 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1537 - - gmx:100810366 1280.39