Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1536 ATGTCATCATCGTCTTCCCAGAGCCTCAGAATTGGCATAGTTGGATTCGGCACCTTTGGCCAATTTCTGGCCAAGACAATGATAAAACAAGGCCACTCTCTCTCTGCAACTTCTCGATCCGATTACTCCGACCTCTGTCTCCAAATGGGCATTCACTTTTACAGGGATGTGAGCGCGTTCCTTGCTGCTGACATAGATGTCATAGTGTTGTGCACATCGATATTATCGCTATCCGAGGTTGTGGGGTCAATGCCACTCGCTTCCCTGAAGCGCCCATCACTCTTTGTTGATGTTCTTTCAGTCAAAGAGCACCCAAGAGAACTTCTGCTACGAGAGTTGCCAGTGAACTCCGACATTCTCTGCACTCACCCTATGTTTGGCCCTGTCAGTGGCAAGAATGGATGGAAAGGTCTCACTTTCATGTATGACAAAGTTCGGATAAGAAATGAAGCTATCTGCTCTGGTTTCATCCAAATTTTTGCCAGTGAGGGTTGCAAGATGGTACAAATGACTTGTGAGGAACATGACAAAGCAGCTGCGAAGAGCCAATTTATCACACACACAATTGGCAGAACATTGGCAGAAATGGATATTAAATCCACACCTATTGACACCAAGGGCTTTCAGGAACTTGTTAAATTGAAGGAGACGATGATAGGAAATAGTTTTGATCTGTTCAGTGGATTATACGTGTATAACAGATTCGCCAGACAGGAGCTGGAAAACCTTGAACATGCCTTGCAAAAAGTCAAAGAAACGCTGCTTGAAAGGATGAACGAGGAGAAGGGTCAAGAAAAGAACTGA 804 0.4478 MSSSSSQSLRIGIVGFGTFGQFLAKTMIKQGHSLSATSRSDYSDLCLQMGIHFYRDVSAFLAADIDVIVLCTSILSLSEVVGSMPLASLKRPSLFVDVLSVKEHPRELLLRELPVNSDILCTHPMFGPVSGKNGWKGLTFMYDKVRIRNEAICSGFIQIFASEGCKMVQMTCEEHDKAAAKSQFITHTIGRTLAEMDIKSTPIDTKGFQELVKLKETMIGNSFDLFSGLYVYNRFARQELENLEHALQKVKETLLERMNEEKGQEKN* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1536 267 Gene3D - 1 176 - -
Vra2g1536 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 170 IPR036291 -
Vra2g1536 267 PANTHER AROGENATE DEHYDROGENASE-RELATED 3 265 IPR045011 GO:0006571|GO:0033730
Vra2g1536 267 Pfam Prephenate dehydrogenase, nucleotide-binding domain 33 132 IPR046826 -
Vra2g1536 267 PANTHER AROGENATE DEHYDROGENASE 1, CHLOROPLASTIC-LIKE 3 265 - -
Vra2g1536 267 Coils Coil 233 260 - -
Vra2g1536 267 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 9 267 IPR003099 GO:0004665|GO:0006571|GO:0008977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1536 Vra-Chr2 23273569 23275680 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1536 K15227 - gmx:100787362 436.417