Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1533 ATGGGAAAATATCTTGAATCTGCGGCGAGGCTGGAGGAGTTATCGCGGATTGTGTCATCTGCGAAGCCCAATATCAGGCCGAAGGGGACGCTACCCAGATCGCCCAGCCGTGTGGTCACTCCTCGAAGTGCGACCCCAATTGGTGTTAAGGTCGAGCTTGCCAAAAAGATGGAACCTTTGGAAGAATGTCGAACACCCCTCGCCAAGGTTGTTGCCGATTGCGCCAAGCGGTGGTTCCAGGACACCCTCAAGGAGGCCAAGGCTGGGGACACTGGCATGCAGGTTTTGGTGGGTCAAATGTATAACTCTGGCTATGGTGTTCCAAGGGATCCCCAAAAGGGACATGTTTGGATTAGTAAAGCGTCAAGAAATCGAAATTCAGTATGGAAAGTGTGTGGTAAACGGCCAGGTTACAGAGCAAGTGATTCAGATTCATGTGATCAGGAGAACAAAGATAAATCACGTCCTTAA 471 0.5032 MGKYLESAARLEELSRIVSSAKPNIRPKGTLPRSPSRVVTPRSATPIGVKVELAKKMEPLEECRTPLAKVVADCAKRWFQDTLKEAKAGDTGMQVLVGQMYNSGYGVPRDPQKGHVWISKASRNRNSVWKVCGKRPGYRASDSDSCDQENKDKSRP* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1533 156 PANTHER EXPRESSED PROTEIN 1 153 - -
Vra2g1533 156 MobiDBLite consensus disorder prediction 19 43 - -
Vra2g1533 156 MobiDBLite consensus disorder prediction 140 156 - -
Vra2g1533 156 MobiDBLite consensus disorder prediction 133 156 - -
Vra2g1533 156 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 153 - -
Vra2g1533 156 SMART sel1 91 126 IPR006597 -
Vra2g1533 156 SUPERFAMILY HCP-like 83 124 - -
Vra2g1533 156 Gene3D Tetratricopeptide repeat domain 45 132 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1533 Vra-Chr2 23263382 23265044 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1533 - - gmx:100779520 262.307