Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra2g1532 | ATGCGCATGCTCACCGGCGATTCCACCGCCGAAACCTTCCGATTCGTTCCGCAATCCATCGCCGCCTTCGGCTCCACTGTCCTCGTCGAGGGCTGCGACACCACCCGTAACATTGCCTGGGTTCACGCCTGGACTGTCGCGGATGGGATAATTACTCAGGTGAGAGAGTACTTTAACACTGCCCTCACCGTCACCCGCTTCGAAGCTTCCGGCGAGATTGTTCCCGCAAGCTCCGGCACCGGCCGCTTTCCTTGTGTGTGGGAGAGCAGCGTATCGGGTCGGGTCGGGAAATCCGTGCCCGGTTTGGTTCTTGCAATATAA | 321 | 0.5919 | MRMLTGDSTAETFRFVPQSIAAFGSTVLVEGCDTTRNIAWVHAWTVADGIITQVREYFNTALTVTRFEASGEIVPASSGTGRFPCVWESSVSGRVGKSVPGLVLAI* | 107 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra2g1532 | 106 | PIRSF | Wun1 | 1 | 106 | IPR016533 | - | |
| Vra2g1532 | 106 | Pfam | Wound-induced protein WI12 | 1 | 106 | IPR009798 | - | |
| Vra2g1532 | 106 | PANTHER | OS07G0691300 PROTEIN | 1 | 106 | IPR009798 | - | |
| Vra2g1532 | 106 | SUPERFAMILY | NTF2-like | 3 | 63 | IPR032710 | - | |
| Vra2g1532 | 106 | PANTHER | SENESCENCE ASSOCIATED GENE 20 | 1 | 106 | - | - | |
| Vra2g1532 | 106 | Gene3D | - | 1 | 74 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra2g1532 | Vra-Chr2 | 23253132 | 23254039 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra2g1532 | - | - | gmx:100778637 | 185.652 |