Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1523 ATGGAAGCCAATGCAGATTATACCCAAGATGCCACTGTTGATTTCCGTGGCCACCCTGCACTTTCATCCAAAACCGGCAAATGGAAGGCTTGTGCTTTTCTTGTTGGGTATGAAGCATTTGAAAGGATGGCCTTTTATGGAGTGGCTTCGAACTTGGTGAATTACCTTACAAGCCAACTTCATGAAGACACAGTTTCATCAGTGAGGAATGTGAATAACTGGTCAGGATCTGTGTGGATAACGCCAATTCTTGGAGCTTGCATAGCAGATTCTTACTTGGGTCGCTTCTGGACTTTCACTCTCTCATCTCTCATTTATGTCTTGGGTATGACACTTCTGACAGTAGCAGTGTCACTGAAGAGCTTGAGACCAACATGCAGCAATGGCATATGCAACAAGGCTTCGACCTCACAGATTGCATTTTTCTACACAGCCCTTTACACAATGGCAATTGGGGCAGGGGGAACAAAACCCAACATCTCAACGTTAGGTGCTGACCAGTTTGATGACTTCAACCCGAATGAGAAAGAGCTAAAGGCCTCCTTCTTCAACTGGTGGATGTTCACCTCATTCTTGGGTGCTTTCGTTGCCAGTTTAGGATTGGTATACATTCAAGAGAACTTGGGATGGGGACTTGGTTATGGTATTCCCACTGCTGGTCTCATGCTTTCATTGCTTATATTCTACATAGGCACACCCATATATCGTCACAAAGTAAGGACAACCACTACTCCTGCTAGGGACCTCCTTCGTGTTCCCATTGCCGCATTCAGGAACAGAAAACTCCAACTTCCTACTGACCCCTCTCATCTCTATGAGCACAACCTCCAACATTATGTTACTACTGGAAAACGTCAGTTCTATCACACTCCAGCACTCAGGTTTTTGGACAAGGCTGCTATTAAAGAAGACAGTGTTGGTTCCAAAAGGGTACCGCTGACAGTAACCCAAGTAGAAGGCTCTAAACTTATCTTTGGTATGGCCCTAATATGGCTGGTGACACTGATTCCAAGCACTATTTGGGCACAAATCAACACTCTTTTTGTGAAACAAGGAACCACTTTGGACAGAAACCTTGGACCTCATTTTAGAATTCCCTCAGCTTCTCTTGGAAGCTTTGTGACACTTTCCATGCTTCTCTCAGTGCCAATGTACGATCGGTTTTTTGTACCGTTTATGCGTCAGAAAACTGGTCATCCGAGAGGAATCACATTGCTTCAAAGGCTTGGGATTGGATTTTCAATCCAGATCATAGCCATTGCAATTGCTTATGCAGTAGAAGTTAGAAGAATGCATGTTATCAGTGCAAACCACGTAGCTGGACCTAAAGATATTGTCCCCATGAGTATATTTTGGCTGATGCCTCAGTATGTATTAATAGGGATAGCAGACGTGTTTAATGCCATTGGATTACTAGAATTCTTCTATGATCAATCCCCTGAAGACATGCAGAGCCTAGGAACGACATTCTTCACTAGTGGGATCGGTGTTGGGAACTTCTTGAACAGCTTTTTGGTGACAATGGTTGATAAAATATCAGGAAGGGGTGACAAAAAGAGCTGGATAGGGGACAACTTGAATGATTCTCACTTGGACTACTATTATGGGTTTTTATTGGTCATGTCAAGTATCAATTTGGTGGTTTTTCTTTGGGTTTCAAGTAGGTACATATATAAGAGGGAATCAATAAGGGTCAAAGAGAGCCTTTGTGTTCAAATGGAGGGGAACCCAACTTTGGACGCCTCTCTTAGTTTACAAGTGTGA 1764 0.4337 MEANADYTQDATVDFRGHPALSSKTGKWKACAFLVGYEAFERMAFYGVASNLVNYLTSQLHEDTVSSVRNVNNWSGSVWITPILGACIADSYLGRFWTFTLSSLIYVLGMTLLTVAVSLKSLRPTCSNGICNKASTSQIAFFYTALYTMAIGAGGTKPNISTLGADQFDDFNPNEKELKASFFNWWMFTSFLGAFVASLGLVYIQENLGWGLGYGIPTAGLMLSLLIFYIGTPIYRHKVRTTTTPARDLLRVPIAAFRNRKLQLPTDPSHLYEHNLQHYVTTGKRQFYHTPALRFLDKAAIKEDSVGSKRVPLTVTQVEGSKLIFGMALIWLVTLIPSTIWAQINTLFVKQGTTLDRNLGPHFRIPSASLGSFVTLSMLLSVPMYDRFFVPFMRQKTGHPRGITLLQRLGIGFSIQIIAIAIAYAVEVRRMHVISANHVAGPKDIVPMSIFWLMPQYVLIGIADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTMVDKISGRGDKKSWIGDNLNDSHLDYYYGFLLVMSSINLVVFLWVSSRYIYKRESIRVKESLCVQMEGNPTLDASLSLQV* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1523 587 Pfam POT family 96 522 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra2g1523 587 SUPERFAMILY MFS general substrate transporter 21 553 IPR036259 -
Vra2g1523 587 Gene3D MFS general substrate transporter like domains 1 565 IPR036259 -
Vra2g1523 587 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 12 566 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra2g1523 587 CDD MFS_NPF5 28 558 IPR044739 GO:0042937|GO:0042938|GO:0071916
Vra2g1523 587 PANTHER PROTEIN NRT1/ PTR FAMILY 5.1 12 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1523 Vra-Chr2 23198542 23202724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1523 1 585 Organic Solute Cotransporters AT2G40460 71.088 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1523 - - gmx:100803784 1085.86