Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1517 ATGACAAGTTTTGCAGCTGTCTTGTTATGGCATGTCATTGCCTTGCTGGTTGTGGCGAATTTGGGGTATGCTTCAAACCTTGATGCCGAAAAACTCAACGCAGAGGTGATCTATGCCCGCAATGGAGCTGTTGCCACTGATGACCGTCGATGCTCAAGGATCGGCAAGGATATTCTCAGAGAAGGAGGGCATGCTGCGGACGCTGCAGTGGCTGCTGCCCTTTGTTTGGGGGTTGTCAGTCCTGCCTCCAGTGGCCTTGGCGGTGGAGCCTTTATGCTTCTCAGGCAGGCTAATGGCGTGTCCAAAGCCTTTGATATGAGAGAAACTGCTCCTGCTCTTGCTTCTAAGGATATGTATGGTGGAAATACTACTTTGAAGGCCAAAGGCGGCCTCTCTGTAGCAGTTCCTGGAGAACTTGCTGGCCTTCACGTGGCTTGGAAACAATATGGGAAACTTCCATGGAAAAGGCTTGTAAATCCAGCTGAGAAACTAGCGCGTGGGTTTAAAATATCGGCATACCTGCACATGCAGATGAAGGCAACAGAGTCAGATATATTGCAAGACAAGGGTCTTCGTAGCATATTTGCACCGAATGGAAAACTCTTGAACATAGGTGACATATGCTACAATAACAAGCTAGCTGACACTCTCAGAGCAATATCTGTGTTTGGTCCGAAAGCCTTCTATGATGGATGGATTGGTCATAATTTAGTTAAGGATGTTCAGAATGCTGGAGGGATATTGACTACGAAAGACCTCAAAAATTACACTGTTAAACAGAAGAAACCTTTATCTACAAATGTTCTTGGACTAAATCTCCTTGCCATGCCTCCTCCTTCAGGTGGACCTCCAATGATACTACTGCTGAACATCCTAGATCAATATAAACTCCCCTATGGCATTTCTGGTGCCCTGGGGGTCCATCGTGAAATTGAAGCTCTGAAACATGTATTTGCCGTGAGAATGAATCTTGGTGATCCTGATTTTGTTAATATTACAGAGGTTGTTTCTGATATGCTTTCTCGTAGGTTTGCAAAAGTGTTGAAAAATGACATCAATGATAATAAGACTTTTGACCCCAGTCATTACGGTGGCAAGTGGAATCAAATTCATGATCATGGTACAAGTCATTTATGTGTAATAGATCTTGAGAGAAATGCCATTTCCATGACTACTACTGTAAATTCATATTTTGGTTCAAAGATCCTTTCACCAAGTACTGGAATAGTACTGAACAATGAGATGGATGATTTTTCCATGCCTAGAAATGTTTCCGAGGATACCCCACCACCAGCTCCAGCCAATTTCATCGTGCCAGGAAAGCGGCCACTATCATCCATGTCACCAACTATTGCCCTCAAGAATGGGAAGCTAAAAGCTGTAGTAGGTGCAAGTGGAGGTGCTTACATTATTGGTGGAACTTCAGAGGTTCTTTTGAATCACTTCAGTAAAGGATTGGNTCCTTTTTCTTCTGTAACGGCTCCAAGGGTCTATCATCAGCTAATTCCTAATGTGGTTAACTATGAGAATTGGACAACTGTGAGCGGTGACCACTTTGAACTTAGCGCTGATATAAGGAATGTCCTTAGAAGTAAGGGTCATGTCCTAAACGGCCTTGCTGGTGGGACTATTTGTCAATTTATTGTTATAGACGATATTGTGTCATCAAGAAAAACTAAAGTGAATGGAAATGAAAGGCTTGTGGCAGTGAGTGATCCAAGAAAGGGTGGTCTTCCTGCAGGCTTTTGA 1749 0.4357 MTSFAAVLLWHVIALLVVANLGYASNLDAEKLNAEVIYARNGAVATDDRRCSRIGKDILREGGHAADAAVAAALCLGVVSPASSGLGGGAFMLLRQANGVSKAFDMRETAPALASKDMYGGNTTLKAKGGLSVAVPGELAGLHVAWKQYGKLPWKRLVNPAEKLARGFKISAYLHMQMKATESDILQDKGLRSIFAPNGKLLNIGDICYNNKLADTLRAISVFGPKAFYDGWIGHNLVKDVQNAGGILTTKDLKNYTVKQKKPLSTNVLGLNLLAMPPPSGGPPMILLLNILDQYKLPYGISGALGVHREIEALKHVFAVRMNLGDPDFVNITEVVSDMLSRRFAKVLKNDINDNKTFDPSHYGGKWNQIHDHGTSHLCVIDLERNAISMTTTVNSYFGSKILSPSTGIVLNNEMDDFSMPRNVSEDTPPPAPANFIVPGKRPLSSMSPTIALKNGKLKAVVGASGGAYIIGGTSEVLLNHFSKGLXPFSSVTAPRVYHQLIPNVVNYENWTTVSGDHFELSADIRNVLRSKGHVLNGLAGGTICQFIVIDDIVSSRKTKVNGNERLVAVSDPRKGGLPAGF* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1517 582 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 35 582 IPR029055 -
Vra2g1517 582 Pfam Gamma-glutamyltranspeptidase 57 577 - -
Vra2g1517 582 PRINTS Gamma-glutamyltranspeptidase signature 64 89 - -
Vra2g1517 582 PRINTS Gamma-glutamyltranspeptidase signature 132 150 - -
Vra2g1517 582 PRINTS Gamma-glutamyltranspeptidase signature 150 169 - -
Vra2g1517 582 PRINTS Gamma-glutamyltranspeptidase signature 247 263 - -
Vra2g1517 582 PRINTS Gamma-glutamyltranspeptidase signature 276 295 - -
Vra2g1517 582 PRINTS Gamma-glutamyltranspeptidase signature 375 393 - -
Vra2g1517 582 PRINTS Gamma-glutamyltranspeptidase signature 399 417 - -
Vra2g1517 582 PRINTS Gamma-glutamyltranspeptidase signature 439 454 - -
Vra2g1517 582 PRINTS Gamma-glutamyltranspeptidase signature 463 480 - -
Vra2g1517 582 Gene3D - 263 367 IPR043138 -
Vra2g1517 582 PANTHER GAMMA GLUTAMYL TRANSPEPTIDASE 24 581 IPR000101 GO:0006751|GO:0036374
Vra2g1517 582 Gene3D - 370 582 IPR043137 -
Vra2g1517 582 TIGRFAM g_glut_trans: gamma-glutamyltransferase 44 515 IPR000101 GO:0006751|GO:0036374
Vra2g1517 582 PANTHER GLUTATHIONE HYDROLASE 1-RELATED 24 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1517 Vra-Chr2 23147410 23151563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1517 13 582 Miscellaneous Gene Families AT4G39640 64.747 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1517 K18592 - gmx:100797040 944.11