Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1507 ATGGACTCGGAATCTGAAGTCCCTGATTCTCAGCCGCACCCTCTCTCGAGCCAAACTGTGGACGCGTGTCACGACATGAATTCCCTTGAAGACCTCGCGAACCGCGGCGCGTGGCGTTCAGTCATCGACAAGGTCTCCCGCGCCCGCGCCCTGTCTCTCCTCCACAAGCCCCACGACCACCTCACCTACCTCGCCTTCAACGCCCTCGCATTCACAAAACTGCGTCGTTTCAACGAAGCCTCGGCGGAGCTGGATTCCCTCGAAGACCTCGATAGTTCCCACTACCGCTACGAAACCTACCCCAAAATCTACCCTAACCGGGTGGGATCGATGGTCCCTTTCTCCCTCCGGTGGCTCCATGCCCTAATTCCAATCAAACTAGGGCAACGTCAGCAGGGAATGGATCGCTTCTACACACTCCTTGACTTCGTGCGCGGGAAGATCAGGGAAAAGGGGGAAAACAACAACCTCGGCGTCTCCCTTAAACTTTGGCGTAAACGAGAAGTTTTTGTCGTGAATTGCATCATAGGGCACCATTTAAGTCAGAAAGAGTTCGGCGTGTGTTTGAGTTTGATGAAGGAGCTTCTCTCTCGCGATGATGGTTCGGACCCTTTGTTGGTTTCGCAACTTGGGTATATGCAGTTGCAGATTGGGGACTTGGAGGGTGCGAAAGTTTCTTTTTTGAAGGTGGAGAGTGAGGGAAAGAATAACGGGTCGTTGAGCGAGGTTGAGTTTAAGAACCTTGTGAATAGGAACAAGGCGTTGGTGTATTTGGTTGGTAAGGATTATGTCTCGGCGGTGAGGGAGTACGAAGAGTGCATTGAGAGGGACAGCGCGGATGTCGTGGCTGTGAATAACAAGGCTCTATGTTTGATGTATCTTAGGGACTTATCGGATTCTATTAAGGTGTTGGAGAGTGCGCTTGAGAGAGTTCCCACGGTGGCTCTCAATGAGACGCTTGTTGTCAATTTGTGTAGTATGTATGAATTAGCGTATGTTAATCACTCTGATATTAAGAGAACGCTTAGTAATTGGATTGCTCGTGTTGCACCTGATGATTTTGATGCATCTTGTACTCGTACATGA 1086 0.5028 MDSESEVPDSQPHPLSSQTVDACHDMNSLEDLANRGAWRSVIDKVSRARALSLLHKPHDHLTYLAFNALAFTKLRRFNEASAELDSLEDLDSSHYRYETYPKIYPNRVGSMVPFSLRWLHALIPIKLGQRQQGMDRFYTLLDFVRGKIREKGENNNLGVSLKLWRKREVFVVNCIIGHHLSQKEFGVCLSLMKELLSRDDGSDPLLVSQLGYMQLQIGDLEGAKVSFLKVESEGKNNGSLSEVEFKNLVNRNKALVYLVGKDYVSAVREYEECIERDSADVVAVNNKALCLMYLRDLSDSIKVLESALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSNWIARVAPDDFDASCTRT* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1507 361 SMART tpr_5 247 280 IPR019734 GO:0005515
Vra2g1507 361 SMART tpr_5 281 314 IPR019734 GO:0005515
Vra2g1507 361 SMART tpr_5 204 237 IPR019734 GO:0005515
Vra2g1507 361 PANTHER F-BOX DOMAIN, TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN PROTEIN-RELATED 19 360 - -
Vra2g1507 361 Gene3D Tetratricopeptide repeat domain 26 345 IPR011990 GO:0005515
Vra2g1507 361 SUPERFAMILY TPR-like 199 316 IPR011990 GO:0005515
Vra2g1507 361 PANTHER D-ALANYL-D-ALANINE CARBOXYPEPTIDASE 19 360 - -
Vra2g1507 361 MobiDBLite consensus disorder prediction 1 21 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1507 K20309 - gmx:100779691 662.914