Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1505 ATGGCCAATGCACTACAAAACGCCGCCATCTCCACAATCACGTTTGGAGACCACTATTCCTTTTCTCGTTGCTTTTTTCCATCCCTATCCACACTTCCTTTCAGAGCCATGCAGAAAGGAAATCACGTGGAGCTCAACAAAAGGGTGGTACTGATAAAGGCAAGAAATAAGAGTGATTTTGATGACGTAGAAGTTGATGTTTCTTTGAGCCACAGAGTTAATGCTTTGAAGCCTTCCAAAACTATGGCAATAAGCGATCATGCCACTGCTCTGTTACAAGCTGGAGTTCCCGTTATTCGCTTAGCGGCTGGAGAACCTGACTTTGACACACCCACTGTTATAGCCGAGGCTGGGATGAATGCAATTCGTGACGGTCACACTAGATATACTCCTAATGCCGGAACATTGGAATTACGCCAAGCAATATGTCACAAGCTAAAAGAGGAGAATGGAATCACATATACCCCAGATGAGATTTTGGTCAGTAATGGAGCGAAACAGAGTGTTGTTCAAGCAGTGCTTGCAGTTTGTTCCCCAGGAGATGAGGTTGTCATTCCAGGTCCATTCTATGTGAGTTATCCAGAAATGGCAAGACTAGCAGATGCAAATCCTGTGATTATTCCAACCCACATATCTAATAACTTTCTTTTGGATCCGAAACTGCTTGAAGCCAACCTCACAGAAAGATCAAGACTACTTATTCTTTGTTCACCTTGTAATCCAACAGGGTCTGTCTACTCTAAGAAATTACTTGAAGAGATAGCCCAAATTGTAGAAAAGCACCCCAGGCTTCTGGTTCTCTCTGATGAAATTTATGAACACATAATTTATTCACCTGCAACTCACACAAGCTTTGCATCTTTAACTGGAATGTGGGACAGAACACTAACAGTGAATGGGTTTTCCAAGACATTTGCCATGACTGGGTGGCGTCTTGGGTATATTGCTGGTCCAAAACACTTTGTTGCTGCCTGTGGAAAGATTCAAAGTCAGTTCACTTCAGGGGCGAGCAGTATATCTCAGAAAGCTGGTGTTGCTGCATTAGGACTCGGCTATGCAGGTGGAGAGGCTGTTTCCAACATGGTGAAAGCCTTCAGGGAAAGAAGGGATTTCTTGGTTGAAAGCTTTTCAAAAATGGATGGTGTGAAAATATCTGAACCACAGGGGGCATTTTATCTCTTCATTGATTTCAGCTCTTATTATGGAAGAGAAGCTGAAGGGTTTGGCTTAATTGAGAATTCTGACTCCCTCTGTCGATACCTGCTGGAAAAGGGCCTGGTTGCACTGGTGCCGGGAAGTGCATTTGGAGATGATAGTTGCATCCGCATTTCTTATGCAGAATCTCTTACTGTTTTAAAGACAGCAGTAGAGAGAATTAAGAAAGCGCTTATCCCTCTAAGCTCTGCTGCGCATTTTTAA 1419 0.4334 MANALQNAAISTITFGDHYSFSRCFFPSLSTLPFRAMQKGNHVELNKRVVLIKARNKSDFDDVEVDVSLSHRVNALKPSKTMAISDHATALLQAGVPVIRLAAGEPDFDTPTVIAEAGMNAIRDGHTRYTPNAGTLELRQAICHKLKEENGITYTPDEILVSNGAKQSVVQAVLAVCSPGDEVVIPGPFYVSYPEMARLADANPVIIPTHISNNFLLDPKLLEANLTERSRLLILCSPCNPTGSVYSKKLLEEIAQIVEKHPRLLVLSDEIYEHIIYSPATHTSFASLTGMWDRTLTVNGFSKTFAMTGWRLGYIAGPKHFVAACGKIQSQFTSGASSISQKAGVAALGLGYAGGEAVSNMVKAFRERRDFLVESFSKMDGVKISEPQGAFYLFIDFSSYYGREAEGFGLIENSDSLCRYLLEKGLVALVPGSAFGDDSCIRISYAESLTVLKTAVERIKKALIPLSSAAHF* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1505 472 PANTHER GLUTAMATE-OXALOACETATE TRANSAMINASE5 62 467 - -
Vra2g1505 472 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 300 313 IPR004838 GO:0003824|GO:0009058|GO:0030170
Vra2g1505 472 Gene3D - 128 350 IPR015421 GO:0003824
Vra2g1505 472 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 62 467 - -
Vra2g1505 472 Gene3D Aspartate Aminotransferase, domain 1 82 457 IPR015422 GO:0003824
Vra2g1505 472 Pfam Aminotransferase class I and II 97 459 IPR004839 GO:0009058|GO:0030170
Vra2g1505 472 SUPERFAMILY PLP-dependent transferases 69 463 IPR015424 -
Vra2g1505 472 CDD AAT_like 99 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1505 Vra-Chr2 23040873 23044818 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1505 K15849 - gmx:100780254 826.624