Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1496 ATGGCAATCCCAACGCGCCTCCTCCCTCTCCTCCTTTCTCTACTCTCGCTATGCTTCGTCTCAACCGTTAGATCGGACGGAGATTGTGTCTACTCGGTTTATATTCGGACCGGCTCCACCATAAACGGAGGAACCGATTCAATAATTGGACTCAAGGTCTACGACGCGCTCGGCAACGGTATATACATCACCAATCTCGAGGCCTGGGGCGGGTTAATGGAGCCGGGTCACAACTACTACGAGCGGGGCAATCTCGACATTTTCAGCGGTAGAGGCCCATGCTTGGACCAGCCCGTTTGCGCCATCAATTTAACTTCGGACGGGTCGGGGCCCCATCATGGTTGGTACGTTAACTACGTCGAGGTCACTTCCGCTGGAGTCCACGCGGCCTGCTCTAGTTCGCAGTTCACGGTGGAGGAGTGGCTTGCAACCGACAGGTCGCCTTATCAGCTCTGGACCGTAAGGAACAACTGCCCAAACGTCTTGAGTGAGGCCCGTTCTAAAGCCCATTTCACCGATGTCGTCAGCTCTCGAAATGGGCCTGGGTCTGGTTCCTCTGTTTCGGCCCTGAAACGTTCGCGGGCCGCTATGTAG 594 0.5572 MAIPTRLLPLLLSLLSLCFVSTVRSDGDCVYSVYIRTGSTINGGTDSIIGLKVYDALGNGIYITNLEAWGGLMEPGHNYYERGNLDIFSGRGPCLDQPVCAINLTSDGSGPHHGWYVNYVEVTSAGVHAACSSSQFTVEEWLATDRSPYQLWTVRNNCPNVLSEARSKAHFTDVVSSRNGPGSGSSVSALKRSRAAM* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1496 197 PANTHER - 1 188 - -
Vra2g1496 197 MobiDBLite consensus disorder prediction 173 197 - -
Vra2g1496 197 Pfam PLAT/LH2 domain 31 149 IPR001024 GO:0005515
Vra2g1496 197 Gene3D PLAT/LH2 domain 30 150 - -
Vra2g1496 197 ProSiteProfiles PLAT domain profile. 29 156 IPR001024 GO:0005515
Vra2g1496 197 PANTHER PLAT-PLANT-STRESS PROTEIN 1 188 - -
Vra2g1496 197 MobiDBLite consensus disorder prediction 173 190 - -
Vra2g1496 197 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 30 147 IPR036392 GO:0005515
Vra2g1496 197 CDD PLAT_plant_stress 29 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1496 Vra-Chr2 22920280 22921255 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1496 - - pvu:PHAVU_001G251400g 328.176